Leifsonia shinshuensis: F1C12_06030
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Entry
F1C12_06030 CDS
T06806
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
lse
Leifsonia shinshuensis
Pathway
lse03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F1C12_06030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lse03000
]
F1C12_06030
03400 DNA repair and recombination proteins [BR:
lse03400
]
F1C12_06030
Enzymes [BR:
lse01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
F1C12_06030
Transcription factors [BR:
lse03000
]
Prokaryotic type
Helix-turn-helix
AraC family
F1C12_06030
DNA repair and recombination proteins [BR:
lse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
F1C12_06030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QNE37573
UniProt:
A0A7G6YGF8
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All DBs
Position
1249647..1251320
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AA seq
557 aa
AA seq
DB search
MSVARVRLEGMSSTTSKPSAPAKAGDRLADPVFAQRYRAMSARDARFDGQFITGVHSTGI
YCRPSCPAVTPKADNVTFYLTAAAAHEAGLRACKRCLPDAVPGSPEWNVRDDLAARAMRL
IADGTVEREGVPGLAHRLGYTPRHLGRVLTAELGAGPLALARAHRAQTARLLLAGTDMPV
TDVAFAAGFSSVRQFNETMAEIYHVTPGAIRASARRRPGIAHGPMVAGATAGASLTLRLP
ARAPFDGGRVLAFLAARAIEGMESAVAGAGTDAIAPSYSRALRLPHGPAAIRLTLAGDPD
APAIECEASLADMADLAPLVARVRRLLDLDADAEAIDSALAADPVLAPSVAAAPGMRVPG
AVDPEEILFRALIGQQVSVPAARTALARLTEALGEPVAIGGFTRLFPTSEAIAEHGREVL
RGPGKRIDAIIGAATALADGSLVIDVGESRAELEARLVALPGIGPWTAGYVALRVLGSPD
VLLIGDLALRQGAARLGLPAEPRELAARGAVWSPWRSYAGMHLWESAHEAQREAREQRAA
QRATPPARRSPAPTTAA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcccgtgtcaggctggaaggcatgagcagcaccacgtcgaagcccagcgcc
cccgcgaaagccggcgaccgcctcgccgaccccgtgttcgcgcagcgctaccgggcgatg
agcgcccgggacgcccggttcgacggccagttcatcaccggcgtccactccaccgggatc
tactgccggccgagctgcccggcggtgacgccgaaggccgacaacgtcaccttctacttg
acggccgccgcggcgcacgaggccgggctgcgcgcctgcaagcgctgcctgcccgacgcc
gtccccggctcgccggagtggaacgtccgcgacgacctcgccgcccgagcgatgcgcctg
atcgccgacgggacggtcgagcgggagggcgtacccggcctcgcccaccggctcggctac
acgccgcggcacctcggccgcgtgctcaccgccgagctcggcgccggaccgctcgcgctg
gccagggcgcaccgggcgcagaccgcgcggctgctgctggccggcacggacatgccggtc
accgacgtggcgttcgccgccgggttctccagcgtgcggcagttcaacgagacgatggcg
gagatctaccacgtgacgcctggggcgatccgggcgtccgcgcggcgccggcccgggatc
gcgcacgggccgatggtggcgggcgcgaccgcgggggcctcactgacgctgcggctgccg
gcgcgggcgccgttcgacggcgggcgggtgctcgccttcctggcggcacgcgccatcgaa
ggaatggagtccgcggtcgccggcgcgggaaccgacgccatcgcaccctcgtacagccgc
gccctccgcctgccgcacggccccgccgcgatccggctcacgctcgccggcgaccccgac
gcccccgcgatcgagtgcgaggcgagtctcgcggacatggccgacctcgccccactcgtg
gcgcgcgttcgccgcctgctcgacctggacgccgacgccgaggcgatcgactcggcgctg
gcggccgacccggtgctcgcgccgtccgtggccgcggcgccggggatgcgggtgccgggc
gcggtcgacccggaggagatcctgttccgcgcgctgatcggccagcaggtgtcggtgccc
gctgcgcgcaccgcgctcgcccggctcaccgaggccctcggcgagccggtggcgatcggc
gggttcacgcggctcttcccgacatcggaggcgatcgccgagcacggtcgggaggtgctg
cgcgggcccggcaaacgcatcgacgcgatcatcggcgccgcgaccgccctcgccgacggc
tcgcttgtgatcgacgtgggcgagtcccgcgccgagctggaggcccggctggtggcgctc
cccggcatcggcccgtggacggcgggctacgtcgcgctgcgcgtcctcggcagcccggac
gtgctgctgatcggcgacctcgcgctgcggcagggcgcagcacggctcggcctccccgcg
gagccgcgcgagctcgcggcccgcggtgcggtgtggtcgccgtggcgcagctacgcgggg
atgcacctgtgggagagcgcgcacgaggcgcagcgggaggcgcgcgagcagcgggcggcg
cagcgggcgacccctccggcccggcgtagccccgcaccgaccaccgcggcgtag
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