Leifsonia shinshuensis: F1C12_06395
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Entry
F1C12_06395 CDS
T06806
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lse
Leifsonia shinshuensis
Pathway
lse02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
F1C12_06395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lse02000
]
F1C12_06395
Transporters [BR:
lse02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
F1C12_06395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
AAA_16
ABC_membrane_2
AAA
AAA_30
RsgA_GTPase
TsaE
AAA_23
AAA_29
MMR_HSR1
NB-ARC
DO-GTPase2
AAA_24
ABC_ATPase
ATP_bind_1
AAA_14
DUF87
AAA_28
cobW
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QNE34788
UniProt:
A0A7G6Y8H3
LinkDB
All DBs
Position
complement(1320469..1322490)
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AA seq
673 aa
AA seq
DB search
MSRADGARGGATQQTPARQAPAQQAPVRTPVRRGPGGGPFGGMTMPGDKSMNFGPSAKRL
AARLRPEWIGIVFVTVLAVVSVVFAVLGPKLLGNAINLVFAGAISAQLPKGITQAQAIAG
LRANGQGQLADLISGMTLTPGEGIDFTAVGHVLMWVLALYIASSLFAYLQGYVLNGITQR
TVYRLRQDVEAKIHRLPLTYFDKMQRGELLSRVTNDIDNISQTLQQTMSQLLTSLLTVIG
VTVMMFVVSPLLAVIALITIPLTLVVTMLIAKRSQRLFVAQWRNTGELNGQIEEAFTGHS
LVKVFGRHREVEERFRSKNQEMYQASFGAQFISGLIMPSMMFVGNLMYVAIAVVGGLQVA
NGAMQLGDVTAFIQYSRQFTQPLTQLGSMANLLQSGVASAERVFELLDAEEQSPDPAEPQ
SPHGTRGRLAFEDVSFRYVADKPLIEDLSLVAEPGQTVAIVGPTGAGKTTLVNLMMRFYD
LDSGRITLDGVDIASMTRHDLRDRMGMVLQDTWLFKGTIRENIAYGRPDATEEEILDAAR
ATYVDRFVHSLPDGYDTVLDDEGSNVSAGEKQLLTIARAFLARPSVLILDEATSSVDTRT
ELLVQKAMSALRADRTSFVIAHRLSTIRDAGLILVMEAGRIVEQGTHSELLARGGAYYTL
YNAQFAAPAEEEA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgcagacggcgcccgtggcggcgcgacccagcagactccggctcggcaggct
cccgcccagcaggcccccgtgcggacccccgtccgccgcggcccgggcggcggcccgttc
ggcggcatgacgatgccgggcgacaagtcgatgaacttcggcccgtcggccaagcgcctc
gccgcgcgactgcggccggagtggatcgggatcgtgttcgtcacggtcctcgcggtggtc
agcgtcgtgttcgcggttctcgggccgaagctgctcggcaacgcgatcaacctcgtgttc
gccggcgcgatctccgcccagctcccgaagggcatcacgcaggcgcaggcgatcgcaggg
ctccgggcgaacgggcagggccagctcgccgacctcatctccgggatgacgctgaccccg
ggcgaggggatcgacttcaccgccgtcggccacgtgctgatgtgggtgctggcgctctac
atcgcgtcgtcgctgttcgcgtacctccagggctacgtgctcaacgggatcacgcagcgc
acggtgtaccggctgcgccaggacgtggaggccaagatccaccgcctcccgctgacctac
ttcgacaagatgcagcgcggcgagctgctcagccgggtcacgaacgacatcgacaacatc
tcgcagaccctccagcagacgatgagccagctgctcacctcgctgctgacggtgatcggc
gtgacggtgatgatgttcgtcgtgtccccgctgctggcggtcatcgcgctcatcaccatc
ccgctgaccctcgtggtcacgatgctgatcgccaagcggtcgcagcggctgttcgtcgcg
cagtggcgcaacaccggcgagctgaacgggcagatcgaggaggccttcaccggccactcg
ctcgtgaaggtcttcgggcgccaccgcgaggtggaggagcggttccgctccaagaaccag
gagatgtaccaggcgagcttcggcgcgcagttcatctccggtctgatcatgccgtcgatg
atgttcgtcgggaacctgatgtacgtcgcgatcgcggtggtcggcggcctccaggtcgcc
aacggcgcgatgcagctcggcgacgtgacggcgttcatccagtactcgcgccagttcacc
cagccgctcacgcagctcgggtcgatggccaacctgctgcagtccggcgtcgccagcgcc
gagcgggtcttcgagctgctggacgccgaggagcagagccccgacccggccgagccgcag
agcccgcacggcacccgcggccggctggccttcgaggacgtgtcgttccgctatgtggcg
gacaagccgctcatcgaggacctgtcgctggtggccgagccgggacagaccgtcgcgatc
gtcgggccgaccggcgcgggcaagaccacgctggtcaacctgatgatgcgcttctacgac
ctggactccggccggatcaccctcgacggcgtcgacatcgcgtcgatgacccgccacgac
ctccgcgaccggatggggatggtgctgcaggacacctggctgttcaagggcaccatccgg
gagaacatcgcctacggccgcccggacgcgaccgaggaggagatcctggacgcggcgcgc
gccacctacgtcgaccggttcgtgcactcgcttccggacggctacgacacggtgctggac
gacgagggctcgaacgtgtcggccggcgagaagcagctgctcacgatcgcgcgggcgttc
ctcgcgcggccgagcgtgctcatcctggacgaggcgacctcctcggtcgacacccgaacc
gagctgctggtgcagaaggcgatgagcgcgctgcgcgccgaccgcacgtcgttcgtgatc
gcgcaccggctgtccacgatccgcgacgccgggctcatcctcgtgatggaggccggccgg
atcgtggagcagggcacccactcggagctgctcgcccgcggcggcgcgtactacacgctc
tacaacgcacagttcgcggcgcccgcggaagaggaggcgtaa
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