Leifsonia shinshuensis: F1C12_06765
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Entry
F1C12_06765 CDS
T06806
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
lse
Leifsonia shinshuensis
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
HTH_20
TetR_N
RHA1_ro05818_N
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QNE34857
UniProt:
A0A7G6Y8P2
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Position
complement(1392822..1393778)
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AA seq
318 aa
AA seq
DB search
MPAPLHRVAVLVLEGAKPLDVGIPAQVFTTRASMPYEVRVCGAAPGLVTGGDGLSYHVAH
GLEALAWADIVFLPGYRHPDREDPPAAVVAALLAAHARGARLAAISTGAFALAATGLLDG
KRATTHWHYTRALAQRYPLIRVDENVLFVDEGDVLTSAGAASGIDLCLHILRGDLGIAAA
NHAARRLVAAPYRSGGQAQYVPRSVPEPLGERFAAVREWALHRLGDPLTLEVLARRAAVS
PRTFSRRFVEDTGYTPMQWVMRARIDVARELLERSELSVEQIAADVGLGTGANLRLHFQR
ILGTTPSDYRRTFSGDAG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgccccgctgcatcgtgtcgccgtcctcgtgctggagggcgccaagcccctggac
gtcggaatcccggcacaggtgttcacgacgcgggcgagcatgccctacgaggtccgcgtc
tgcggggccgcgcccgggctggtgaccggcggcgacgggctgtcgtatcacgtggcgcac
gggctggaggcgctcgcctgggcggacatcgtgttcctgccgggctaccgccatcccgac
cgcgaggaccctcccgctgcggtggtggcggccttgctcgccgcccacgcgcgcggcgcc
cggctggcggccatctcgaccggagcgttcgcgctggcggcgaccggcctcctcgacggc
aagcgcgcaaccacccactggcactacacgcgcgccctcgcgcagcgctacccgctgatc
cgggtggacgagaacgtgctgttcgtcgacgagggcgacgtgctcacctcggcgggcgcg
gccagcgggatcgacctctgcctgcacatcctccgcggcgacctcggcatcgccgccgcc
aaccatgccgcccgccggctggtcgccgcgccgtaccgcagcggaggacaggcgcagtac
gtcccgcgcagcgtgcccgagccgctcggggaacggttcgccgccgtccgtgagtgggcg
ctgcaccggctgggcgacccactcacactggaggttctggcgcgccgggcggcggtgtcg
ccgcgcaccttctcgcgccgcttcgtggaggacaccggctacaccccgatgcagtgggtg
atgcgggcgcgcatcgacgtcgcgcgcgagttgctggagcgctccgagctcagcgtcgag
cagatcgcggcggatgtcggcctcggcacgggagccaacctgcggctgcacttccagcgc
atcctcggcacgacgccgagcgactaccggcgcaccttcagcggtgacgccggctga
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