Leifsonia shinshuensis: F1C12_07460
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Entry
F1C12_07460 CDS
T06806
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
lse
Leifsonia shinshuensis
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lse03009
]
F1C12_07460
Enzymes [BR:
lse01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
F1C12_07460
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
F1C12_07460
Ribosome biogenesis [BR:
lse03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
F1C12_07460
23S rRNA modification factors
F1C12_07460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_11
Methyltransf_12
S4_2
Motif
Other DBs
NCBI-ProteinID:
QNE34987
UniProt:
A0A7G6Y922
LinkDB
All DBs
Position
complement(1547460..1548251)
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AA seq
263 aa
AA seq
DB search
MAERLDVALAARGLARSRTHAATLIADGLVTVDGKPVVRASTKVGDEQELVVAGADHYVS
RGAHKLIAALDGFGVAVEGRVALDAGASTGGFSQVLLERGARLVIAVDVGHGQLAPELTR
EDRLFSYEGVNVRELTRESFARLVGPDLRPDLVVADLSFISLAHVLPALREVAAEGADFV
LLVKPQFEVGRTGIREGIVRDAGLRADAVGGVLWSAWDAGLGTAGVMASPIAGSHGNQEA
LVHLRAGASNPTEWLERVRAVTA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacgactggatgtcgcgctcgccgcgcgcgggctggcgcggtcgcggacgcac
gccgcgacgctgatcgcggacggcctcgtgaccgtcgacggcaaaccggtcgtgcgcgcg
tccacgaaggtgggcgacgagcaggagctggtcgtcgccggcgccgaccactacgtgagc
cgcggcgcgcacaagctgatcgcggcgctggacgggttcggagtcgcggtggaggggcgt
gtcgcgctcgacgcgggcgcgtcgacgggaggcttcagccaggttctcctggagcgcggc
gcccgccttgtcatcgcggtggacgtcgggcacgggcagctcgcgcccgagctcacccgt
gaggaccggctgttctcgtacgagggcgtgaacgtccgggagctgacccgtgagtccttc
gcccggctcgtcggccccgacctgcgtcccgacctggtcgtcgccgacctgtcgttcatc
tcgctcgcgcatgtgctccccgcgcttcgcgaggtcgcggcggagggcgcggacttcgtc
ctgctcgtcaagccgcagttcgaggtcggccgcaccggcatccgcgaggggatcgtgcgc
gacgcagggctgcgcgcggacgccgtcggcggcgtgctctggagcgcctgggacgcgggg
ctcggcaccgcgggcgtgatggcctccccgatcgcgggctcgcacggcaaccaggaggcg
ctggtgcacctgcgggcgggcgcgagcaacccgacggagtggctggagagggtgcgagcg
gtcacggcgtga
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