Leifsonia shinshuensis: F1C12_07525
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Entry
F1C12_07525 CDS
T06806
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
lse
Leifsonia shinshuensis
Pathway
lse00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
F1C12_07525
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lse01007
]
F1C12_07525
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lse03016
]
F1C12_07525
Enzymes [BR:
lse01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
F1C12_07525
Amino acid related enzymes [BR:
lse01007
]
Aminoacyl-tRNA synthetase
Class II (U)
F1C12_07525
Transfer RNA biogenesis [BR:
lse03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
F1C12_07525
Prokaryotic type
F1C12_07525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
QNE35000
UniProt:
A0A7G6Y935
LinkDB
All DBs
Position
complement(1560724..1563267)
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AA seq
847 aa
AA seq
DB search
MRVPLSWLGEYVDLEPGTTADEVHAALVSVGLEEEDVHTFEISGPVVVGQVLDFVEEPQS
NGKTIRWCQVRSAPEGQKAADGGDAVHGIVCGARNFFPGDKVVVTLPGSVLPGPFPIAAR
KTYGHVSDGMIASARELGLGDDHEGILRLTTLGLDPEVGADAISLLGLDDTAVEVNVTPD
RGYAFSIRGIAREYSHATGAAFRDPAEAVRVHSTGAHAHGFSVTIDDRAPIRGRVGATVF
VTRVVRDVDGSRPTPPWMVARLKLAGIRSISLIVDITNYVMLELGQPIHGYDLDKLSGGI
IVRRAHAGETLVTLDDQTRVLDEEDLLITDESGAIGLAGVMGGASTEIGAGTSNVLVEAA
NFDPVSIARTARRHKLPSEASKRFERGVDPRVAVAAAARVVQLLEQLAGGHADELGSLLD
TAGEAEPIRLPSAYIPNLIGVAFTDDEVRGALAEIGGTVTGDADGLLVVPPSWRPDLRDK
SDLAEEVARIVGFDRIPSVLPVAPPGRGLSRAQKLRRSVAQMLADNGATEVLAFPFVSEA
QNDLFGSPEAGPVPAVRLANALDATAPYLRTSLLPGLIDVAKRNLARGLVDLRVYELGTV
FLPAGGVLGSEELPLGAALPGDDVLAGLNAGIPAQPRHLAGLIVGSPVEKQPGQAPVAAG
LADALTAVQQTATAVGVRVEPVQSRHQALHPGRTAQLVAHAADGSRVVVGYAGELLPAIA
EDLDLPRVVAVYELDLDALIAVAPADIVAGVIAGFPAATQDLSLVVRDEVPAGELLAAVR
EGAGALLEDIRLVDDYRGAGLPADRKSLTFALRFRADDRTLTAAEASEAKLAGAARAEEL
FGAHIRE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtccccctgagttggctcggcgagtacgtcgacctcgagcccggcaccacggcc
gacgaggtccacgccgccctcgtgtccgtcgggctcgaggaggaggacgtccacaccttc
gagatcagcggcccggtggtcgtcggccaggtgctggacttcgtggaggagccgcagagc
aacggcaagaccatccgctggtgccaggtccgcagcgctccggaaggccagaaggccgcc
gacggtggcgacgccgtccacggcatcgtctgcggcgcccgcaacttcttccccggcgac
aaggtcgtcgtgacgctgcccggctcggtcctgcccggaccgttcccgatcgccgcccgc
aagacctacgggcacgtctcggacggcatgatcgcctccgcgcgcgagctcggcctcggc
gacgaccacgagggcatcctgcggctgacgacgctcgggctcgacccggaggtcggcgcc
gacgccatctcgctgctcgggctggacgacaccgcggtggaggtcaacgtcacgcccgac
cgcggctacgcgttctccatccgcggcatcgcccgcgagtactcgcacgcgaccggcgcg
gctttccgcgacccggccgaggccgtccgcgtccactccacgggagcgcacgcgcacggc
ttcagcgtgacgatcgacgaccgcgcgccgatccgcggccgcgtcggcgccacggtgttc
gtcacgcgcgtcgtccgcgacgtcgacggctcccggccgaccccgccgtggatggtcgcg
cggctgaagctcgccggcatccgctcgatctcgctgatcgtggacatcaccaactacgtg
atgctcgagctcggccagccgatccacggctacgacctcgacaagctctccggcggcatc
atcgtgcgccgcgcgcacgcgggcgagacgctggtgaccctggacgaccagacccgcgtc
ctggacgaggaggacctcctcatcaccgacgagtccggggccatcggcctggccggcgtg
atgggcggagcgtccaccgagatcggcgcgggcacgagcaacgtgctggtggaggccgcc
aacttcgacccggtgtcgatcgcgcgcaccgcccgccggcacaagctgccgagcgaggcc
tccaagcgcttcgagcgcggggtcgacccgcgcgtcgccgtcgcggcggccgcccgcgtc
gtgcagctcctggaacagctcgccggtggccacgccgacgagctcggctcgctgctcgac
accgcgggggaggcggagcccatccgcctgccgagcgcctacatcccgaacctgatcggg
gtggcgttcaccgacgacgaggtgcgcggcgcgctcgccgagatcggcggcaccgtgacc
ggcgacgccgacggcctgctcgtcgtgccgccgagctggcgtcctgacctgcgcgacaag
tccgacctggcggaggaggtcgcccgcatcgtcgggttcgaccgcatcccgtccgtgctg
cccgtcgcgcctcccggccgcggcctgtcgcgcgcgcagaagctgcgccgctcggtcgcc
caaatgctcgccgacaacggcgcgaccgaggtgctcgccttcccgttcgtctcggaggcg
cagaacgatctgttcggctcgcccgaggccggcccggtgccggcggtgcgcctggcgaac
gcgctcgacgcgaccgccccgtacctgcgcacctcgctccttcccggcctgatcgacgtg
gccaagcgcaacctcgcgcgcggcctcgtcgacctgcgcgtctacgagctcggcacggtg
ttcctccccgcaggcggcgtgctcggcagcgaggagctgccgctcggcgccgccctcccg
ggcgacgacgtgctcgccggcctgaacgcgggcattcccgcgcagccgcgccacctcgcc
ggcctgatcgtcggcagcccggtggagaagcagcccggccaggcgcccgtcgccgccgga
ctcgccgacgcgctgaccgccgtgcagcagaccgcgaccgccgtgggcgtccgcgtcgag
ccggtgcagagccgccaccaggcgctgcacccgggacgcaccgcccagctcgtggcgcac
gccgcggacggctcgcgcgtcgtcgtgggctacgccggcgagctgctgcccgcgatcgcg
gaggacctcgacctcccgcgcgtcgtcgcggtctacgagctcgacctggacgcgctgatc
gccgtcgcgcccgccgacatcgtcgcgggcgtgatcgccggcttcccggcggcgacgcag
gacctgtcgctcgtcgtgcgcgacgaggtcccggccggcgagctgctggccgcggtccgg
gagggcgccggcgcgctcctggaggacatccgcctggtcgacgactaccgcggcgccggt
ctcccggccgaccgcaagagcctcaccttcgcgctgcgcttccgcgccgacgaccgcacc
ctcaccgcggccgaagccagcgaggcgaagctcgcgggggcggcgcgtgccgaggagctg
ttcggcgcgcatatccgcgagtag
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