Leifsonia shinshuensis: F1C12_08415
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Entry
F1C12_08415 CDS
T06806
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K09695
lipooligosaccharide transport system ATP-binding protein
Organism
lse
Leifsonia shinshuensis
Pathway
lse02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
F1C12_08415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lse02000
]
F1C12_08415
Transporters [BR:
lse02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipooligosaccharide transporter
F1C12_08415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA_29
AAA_23
AAA_27
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QNE35157
UniProt:
A0A7G6Y9J2
LinkDB
All DBs
Position
complement(1754418..1755344)
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AA seq
308 aa
AA seq
DB search
MPTSVITAADLVKKYKDFPAVDGISFEVEAGESFGLLGPNGAGKSTTMRMIGAVSTRTAG
ELSILGLDPDRYGPEIRSQLGVVPQSDNLDTELRVRDNLIVYGRYFGLPSARVRQRADEL
LAFAQLEDKAKAKVDDLSGGMKRRLTIARALINDPRILLLDEPTTGLDPQARHILWDRLF
RLKEQGTTLVLTTHYMDEAEQLCDRLVVVDKGTIMAEGTPASLIRQYSTREVLEVRFGSE
RNAEVAPRLDGIGERVEVLPDRILVYSDDGEAELARLTERGLHPLTSLVRRSSLEDVFLR
LTGRSLIE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgtccgtcatcaccgccgccgacctggtcaagaagtacaaggacttcccggcc
gtcgacgggatcagcttcgaagtcgaggcgggggagtcgttcggcctcctcggccccaat
ggcgcgggcaagtcgaccaccatgcggatgatcggcgcggtctccacgcgcacggcgggc
gagctgagcatcctcgggctcgaccccgaccggtacgggccggagatccggtcgcagctg
ggcgtcgtgccgcagtcggacaacctcgacaccgagctgcgggtgcgggacaacctcatc
gtctacgggcgctacttcggcctcccgtccgcgcgggtgcgacagcgcgccgacgagctg
ctggcgttcgcgcagctggaggacaaggccaaggcgaaggtggacgacctctccggcggc
atgaagcgccggctcaccatcgcgcgtgccctgatcaacgacccgcgcatcctgctgctc
gacgagccgaccaccggactcgacccgcaggccaggcacatcctctgggaccggctgttc
cgcctcaaagagcaggggacgacgctggtgctcacaacgcactacatggacgaagccgag
cagctctgcgaccggctcgtcgtggtcgacaagggcacgatcatggccgaggggacgccg
gcctccctcatccggcagtactcgacgcgcgaggtgctggaggtccgcttcggctccgag
cgcaacgccgaggtcgcgccgcggctcgacgggatcggcgagcgcgtggaggtgctgccc
gaccgcatcctggtctacagcgacgacggcgaggccgagctcgcgcggctgacggagcgc
ggcctccacccgctcaccagcctggtgcgccggtccagcttggaggatgtcttcctgcgg
ctcaccggacggagcctgatcgaatga
DBGET
integrated database retrieval system
