Leifsonia shinshuensis: F1C12_08430
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Entry
F1C12_08430 CDS
T06806
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
lse
Leifsonia shinshuensis
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lse03000
]
F1C12_08430
Transcription factors [BR:
lse03000
]
Prokaryotic type
Helix-turn-helix
XRE family
F1C12_08430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_19
HTH_26
Peptidase_M78
HTH_37
HVO_2718
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QNE35160
UniProt:
A0A7G6Y9J5
LinkDB
All DBs
Position
1759511..1760968
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AA seq
485 aa
AA seq
DB search
MDSTATEAATADVATLGHRIRHFRTQRGLTLDELGAAAGVAASQLSLIENGKREPRVSLL
GTLAAALGVPLAELLSAEPPDARAALEIELSRAQKGSLYGSLGLPAVKPTKGTPTETLEA
LVGLHRELARRANEAIATPEEARRANTELRERMRGQNNYIPDIEVLAEERVRASGHVRGA
LTHREVSVMAEQLGFELIYVDDLPRSTRSITDLENGRIYLPPASIPGGHGLRSMALQAMA
HRLLGHERPASYADFLRQRLEINYFAACALMPEAAAVAFLQQAKKEKDLAVEDFRDAFGV
THEAAALRLTNLATRHLDMPLHFLRVGDDGTLYKGYENDGLPLPTDVTGSIEGQVVCRKW
GARNAFARTNRTTEFYQYTDTPAGTYWCSTQTGSTADGGYSISVGVPFDQAKWFRGRETT
ARAESRCPDESCCKRPATELTGHWTGKAWPSARLHAHILSPLPSGSFPGVDDSDVYTFLE
AHSGA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggactccaccgccaccgaggcggcgaccgccgacgtcgccaccctcgggcaccgcatc
cggcacttccgcacccagcgcgggctgacgctggacgagctcggcgccgccgccggtgtc
gccgccagccagctgtccctgatcgagaacggcaagcgcgagccgcgcgtctcgctgctc
ggcacgctcgccgccgcgctgggcgtcccgctcgcggagctgctgtccgccgagccgccg
gacgcgcgcgccgcgctggagatcgagctctcccgcgcccagaagggctcgctctacggc
tccctcggcctccccgccgtcaaaccgaccaagggcacgccgaccgagacgctggaggcc
ctggtcggcctgcaccgcgagctcgcccgccgcgccaacgaggcgatcgcgacgcccgag
gaggcccggcgcgcgaacacggagctgcgcgagcggatgcgcgggcagaacaactacatc
cccgacatcgaggtgctcgccgaggagcgcgtgcgcgcgtccggccacgtccgcggcgcg
ctcacgcaccgcgaggtcagcgtgatggccgagcaattgggcttcgagctgatctacgtg
gacgacctcccgcgctcgacccgctccatcaccgacttggagaacggccgcatctacctg
ccgccggcctccatcccgggcggccacggcctccgctcgatggccttgcaggcgatggcg
caccgcctgctcggccacgaacgcccggccagctacgcggacttcctgcggcagcggctg
gagatcaactacttcgcggcgtgcgcgctgatgccggaggcggcggcggtggcgttcctg
cagcaggcgaagaaggagaaggacctcgccgtcgaggacttccgcgacgcgttcggcgtc
acccacgaggccgccgcgctgcgcctgaccaacctggcgaccaggcacctggacatgccg
ctgcacttcctccgcgtcggcgacgacggcaccctctacaagggctacgagaacgacggc
ctcccgctcccgaccgatgtcaccggctcgatcgagggccaggtggtctgccgcaagtgg
ggcgcacgcaacgcgttcgcgcgcaccaaccgcaccacggagttctaccagtacaccgac
acccccgcggggacgtactggtgctcgacccagaccggcagcacggccgacggcggctac
tcgatcagcgtcggcgtgccgttcgaccaggccaagtggttccgcggccgggagacgacg
gcgcgcgccgagtcccgctgcccggacgagtcgtgctgcaagcggccggcgaccgagctg
accgggcactggacgggcaaggcgtggccgagcgcgcgcctgcacgcgcacatcctgtcg
ccgctgccgtccgggtccttcccgggagtggacgactcggacgtgtacacgttcctggag
gcgcactccggcgcctga
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