Leifsonia shinshuensis: F1C12_12040
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Entry
F1C12_12040 CDS
T06806
Name
(GenBank) extracellular solute-binding protein
KO
K10117
raffinose/stachyose/melibiose transport system substrate-binding protein
Organism
lse
Leifsonia shinshuensis
Pathway
lse02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
F1C12_12040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lse02000
]
F1C12_12040
Transporters [BR:
lse02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
F1C12_12040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
SBP_bac_11
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
QNE35786
LinkDB
All DBs
Position
complement(2522132..2523484)
Genome browser
AA seq
450 aa
AA seq
DB search
MKKRHLAGALALTAGLALGLTACAPGGSSAAGSSHAVSKDVSGKPVTLKILDFWQGEEGK
WMDSVVKDFEKQHPNITIKRTTQDWGQVMNTLNLRLADPNGPDIALVNNGWQSMGTLAKG
GRILNLDAYSDLYGWKKEIPDTIARQLEFTPDGKQMGTGSLYATPAARSSLIGLYYNKEI
LDKLGLPVPKTLADFEKDAAAVKAAGITPIAYGSQDKGSATSILFATQDLYATSKNIGDF
VYSAGNVPITSTGIVDAAKDVKKWADSGWFTPNYPGVQYADAQAQFMDGKAAFRFEYTGS
LGFSDAQKQTMGYVQLPQVQGGKVVGTGSTAANLSISAKSKHPDAAAAFLDFMASKTAAQ
QAVGHGFLPLLHSGLSTPSGNAELATEISAQQTLDKGNGYVPYFDWSTPSMIDTIGGQLQ
QLYAGQVTPDQLAAAGQKDYDAFQATRKQG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaggcacctcgccggagcgctcgcgctcaccgctggactggccctcggcctg
acagcgtgcgcacccggaggctccagcgccgcgggctcctcgcacgcggtctcgaaggac
gtttccggcaagcccgtcaccctcaagatcctcgacttctggcagggcgaagagggcaag
tggatggactcggtcgtcaaggacttcgagaagcagcacccgaacatcaccatcaagcgc
accacgcaggactggggccaggtgatgaacaccctcaacctccgcctcgccgacccgaac
ggtcccgacatcgcgctcgtcaacaacggctggcagtcgatgggcacgctcgccaagggc
ggccgcatcctcaacctggacgcctactccgacctctacggctggaagaaggagatcccg
gacaccatcgcccgccagctcgagttcacccccgacggcaagcagatgggcaccggctcg
ctctacgccaccccggcggcgcgctcctcgctgatcggcctgtactacaacaaggagatc
ctcgacaagctcggcctgcccgtgcccaagacgctggccgacttcgagaaggacgccgca
gcggtcaaggccgccggcatcaccccgatcgcctacggctcgcaggacaagggctctgcc
acgtcgatcctcttcgcgacgcaggacctctacgcgacctcgaagaacatcggcgacttc
gtctactccgccggcaacgtcccgatcacctcgaccggcatcgtggacgcggccaaggac
gtcaagaagtgggcggactcgggctggttcaccccgaactaccccggcgtccagtacgcc
gacgcgcaggcccagttcatggacggcaaggcggccttccgcttcgagtacaccggctcg
ctcggcttctcggacgcgcagaagcagaccatgggctacgtgcagctcccgcaggtgcag
ggcggcaaggtggtcggcaccggctcgaccgcggccaacctgtccatctcggccaagtcg
aagcacccggacgccgcagcggccttcctcgacttcatggcgtccaagaccgcggcccag
caggcggtcggccacggcttcctcccgctgctgcactcgggcctcagcaccccgagtggc
aacgcggagctggccacggagatctcggcccagcagacgctcgacaagggcaacggctac
gtgccctacttcgactggtcgaccccgtcgatgatcgacacaatcggcggacagctccag
cagctgtacgccggccaggtcacgccggaccagctcgctgcggccggtcagaaggactac
gacgccttccaggccacgcggaagcagggctga
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