Leifsonia shinshuensis: F1C12_14485
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Entry
F1C12_14485 CDS
T06806
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lse
Leifsonia shinshuensis
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lse03032
]
F1C12_14485 (gyrB)
03400 DNA repair and recombination proteins [BR:
lse03400
]
F1C12_14485 (gyrB)
Enzymes [BR:
lse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
F1C12_14485 (gyrB)
DNA replication proteins [BR:
lse03032
]
Prokaryotic type
DNA Topoisomerases
F1C12_14485 (gyrB)
DNA repair and recombination proteins [BR:
lse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F1C12_14485 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QNE36199
UniProt:
A0A7G6YCI4
LinkDB
All DBs
Position
complement(3001195..3003204)
Genome browser
AA seq
669 aa
AA seq
DB search
MTMEPNRAEAEHDYGANEIQILEGLEAVRKRPGMYIGSTGPRGLHHLVYEIVDNSVDEAL
AGYADNIDVRILPDGAVRVDDNGRGIPVDEHPVEKKSTVEVVLTILHAGGKFGGGGYAVS
GGLHGVGSSVVNALSSRLDVEVYRQGFVWRQSYRNGVPQAPLEQGEASERTGTVITFWPS
PETFETVVFDYDTLRTRFQQMAFLNKGLRISISDERAPEVEPVEGEVEEDVEVFAARSEV
FLYERGLTDYVEYLNAAKKAEVVHDEIISFESEDTERKIALEVAMQWTTSYNESVFTYAN
TINTHEGGTHEEGFRAALTTLVNRYAREKNILKEKDDNLSGDDVREGLTAVISVKLSEPQ
FEGQTKTKLGNTEAKAFVQKIVGDQLGDWFDRNPNQAKEIIRKALQAATARIAARKARET
ARRKGLLESGGMPGKLKDCASKDPTLSEIFIVEGDSAGGSAVQGRNPETQAILPLRGKIL
NVEKARLDRALANNEVQAMITAFGAGIGEDFNPEKARYHKIVLMADADVDGQHITTLLLT
LLFRYMRPLIELGYVYLAQPPLYRLKWSNADHEYVYSDRERDAFLAEGLAAGKRIPKDNG
VQRYKGLGEMDYKELWETTMNPETRTLLQVTLDDAAAADEIFATLMGEDVESRRSFIQKN
AKDVRFLDI
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggaaccgaacagggccgaggcggaacacgactacggcgcgaatgagatccag
atcctcgaaggtctcgaagccgtccgcaagcgacccggaatgtacatcggctccaccggc
ccccgcggtctccaccacctggtgtacgagatcgtcgacaactccgtcgacgaggcgctc
gccggctacgccgacaacatcgatgtgcgcatcctccccgacggagcagtccgggtggac
gacaacggccgcggcatcccggtggacgagcacccggtcgagaagaagtcgaccgtagag
gtcgtcctgacgatcctgcacgccggcggcaagttcggcggcggcggttacgcggtctcc
ggcggtctgcacggcgtcggcagctcggtcgtcaacgccctgtcctcccgtctcgacgtc
gaggtgtaccggcagggattcgtctggcggcagagctaccgcaacggtgttccgcaggcg
ccgctcgagcagggcgaagcgtccgagcggaccggaacggtcatcaccttctggccgagc
ccggagacgttcgagaccgtcgtgttcgactacgacaccctccgcacccgcttccagcag
atggccttcctcaacaagggccttcgcatctccatcagcgacgagcgcgctccggaggtc
gagcccgtcgagggtgaggtcgaggaggacgtcgaggtgttcgccgcccgctccgaggtg
ttcctctacgagcgcggtctcaccgattacgtggagtacctgaacgccgcgaagaaggcg
gaggtcgtccacgacgagatcatctccttcgagtcggaggacaccgagcgcaagatcgcg
ctcgaggtcgcgatgcagtggacgaccagctacaacgagtccgtcttcacctacgcgaac
acgatcaacacccacgagggcggcacgcacgaggaaggcttccgcgcggcgctgaccacg
ctggtcaaccggtacgcgcgcgagaagaacatcctcaaggagaaggacgacaacctctcc
ggcgacgatgtgcgcgagggtctcaccgccgtcatctcggtcaagctgtccgagccgcag
ttcgagggccagaccaagaccaagctcggcaacacggaggccaaggccttcgtgcagaag
atcgtcggcgaccagctcggcgactggttcgaccgcaacccgaaccaggccaaggagatc
atccgcaaggcgctccaggccgcgaccgcacgcatcgccgcacgcaaggcgcgcgagacc
gctcggcgcaagggcctcctggagagcggcgggatgccgggcaagctgaaggactgcgcc
tccaaggacccgacgctgtcggagatcttcatcgtcgagggcgactcggcaggcggctcg
gccgtccagggccgcaaccccgagacccaggcgatcctcccgctgcgcggcaagatcctc
aacgtcgagaaggcccggctcgaccgcgcgctcgcgaacaacgaggtccaggccatgatc
acggcgttcggcgccggcatcggcgaggacttcaacccggagaaggcgcggtaccacaag
atcgtgctgatggccgacgcggacgtcgacggccagcacatcacgaccctgctgctgacc
ctgctgttccgctacatgcggccgctcatcgagctcggctacgtctacctcgcgcagccg
ccgctgtaccggctcaagtggtcgaacgccgaccacgagtacgtctactccgaccgcgag
cgcgacgcgttcctcgcggagggcctcgccgccggcaagcgcatccccaaggacaacggc
gtgcagcgctacaagggtctgggcgagatggactacaaggagctgtgggagaccacgatg
aacccggagacgcgcacgctgctccaggtcacgctcgacgacgcggcggcggccgacgag
atcttcgccacgctgatgggcgaggacgtcgagtcgcgtcgttcgttcatccagaagaac
gccaaggacgtgcggttcctcgacatctga
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