Leifsonia shinshuensis: F1C12_16295
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Entry
F1C12_16295 CDS
T06806
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
lse
Leifsonia shinshuensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC2
Sigma70_r2
Big_13
Sigma70_r4_2
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
QNE36516
UniProt:
A0A7G6YDF1
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Position
complement(3361633..3363405)
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AA seq
590 aa
AA seq
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MTRTALDHPTRRVSSWNGRPALSPARSRLLPGDAHQSRPGEPVSRPAARKGAPDALSDSQ
LVDRTRDGDERAYAELWQRHYRAGVTVARAYTAAFDPDDLVSEAFTRMFAAITDGGGPTS
GFRPYLFTVIRNTAASWGRRAAREIAIEHAEEIEDLRFTEASRLAELDRSLAARAFRALP
PRWQEVLWYTEVEALPPREVAPLLGMKANSVAALAVRAREGLRASWIQAHLATVREDSEC
RWAIEHLGAGLRKRLSASVRRRLDDHLAGCGDCRLVAAEAVEVNRRLGFVLLPLAAGIGG
AAAYASGTANGGAAAASAAEPGAGSAGTGSRAWDSTAWRSTAVVASAVVAATSLVAVALG
VAPRETVSAPVAGSAAHSAAAAPGDAGGAAPAPVPVGPPAEPDPAPPATPDDTTGAAVST
QPDADRVPTTTVTPTATPTASPTPTASPTPTASPTPTPTPTPTPTPPAAPPLPAPAILTP
STTIRSRHATVSGTALPGSSVAVALLGASGTAQAHASGTTTSAGMWSVTLDLSALPDGDY
TLTAVASDGSGTSAPATSPVALDRAHAHGRQQGQRTHRTGRVTPGGEIAP
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgacgcggacggccctggatcaccccacacgtcgggtttcgtcatggaatggccgtccg
gcgctctctccagcgcgcagtcgtctccttcccggagacgcccaccagtcccgacctgga
gagcccgtgtcccgtcccgccgcccgcaagggcgcccctgatgccctgtccgacagccag
ctcgtcgatcgcacccgcgacggcgacgagcgggcgtacgcggagctgtggcagcgccac
tatcgcgccggcgtgaccgtcgcccgcgcgtacacggcggctttcgacccggacgacctg
gtgtcggaggcgttcacgcggatgttcgcggcgatcacggacggcggcggacccacctcc
ggcttccggccctacctgttcacggtgatccggaacacggcggcgagctgggggcggcgc
gctgcgcgcgagatcgcgatcgagcacgccgaggagatcgaggacctgcggttcaccgag
gccagccgactggccgagctggaccgttcgctcgctgcccgggcgttccgcgccctcccg
ccgcggtggcaggaggtgctctggtacacggaggtcgaggcgctgccgccgcgcgaggtc
gcgccgctgctcgggatgaaggcgaactccgtggcggcgctggccgtacgggcgcgggag
ggccttcgcgcctcctggatccaggcccacctggcgacggtgcgggaggactcggagtgc
cgctgggcgatcgagcacctgggcgccggcctccgcaagcgcctgtcggcgagcgtgcgc
cgccgcctggacgaccacctcgcgggctgcggggactgccgcctcgtcgcagcggaggcc
gtggaggtgaaccggcgcctcggcttcgtgctcctgccgctcgccgcggggatcgggggc
gcggcggcgtacgcgagcgggacggcgaacggcggggcggccgcggcgagcgccgccgag
ccgggcgcgggatcggcaggaaccgggtcgcgcgcgtgggactcgacggcctggaggtcg
acggcggtcgtggcgtcggccgtcgtcgcggcgacctccctcgtcgcggtagcgctcggc
gtcgcgccccgcgagacggtgtcggcgccggtcgcgggcagcgctgcgcactcggctgcc
gccgcaccgggcgatgccggcggtgcggctccggcgcccgttcccgtcggccctccagcg
gagccggatcccgctccgcccgcgactcccgacgacaccacgggtgctgccgtgtccact
cagccggatgccgaccgggtccccacgacgaccgtgacaccgacagcgacgccgaccgcg
agtccgacgccgaccgcgagtccgacgccaaccgcgagtccgacgccgactcccactccg
accccgacgccgacacctcccgccgcgccgcccctgcccgcaccggcgatcctgaccccg
tcgaccacgatccgctcgcggcacgccaccgtctccggtacggcgctccccggcagcagc
gtcgcggtcgcccttctcggcgcctccggaacagcacaggcgcacgcgagcgggaccacg
acgtcggccgggatgtggtccgtcaccctcgacctctccgcgctgccggacggggactac
accctcaccgccgtcgcgtccgacggcagcggcacgagtgcgcccgccacctcccccgtc
gctctcgatcgcgcgcacgcacacggcagacagcagggtcagcgaactcacaggacggga
cgcgtcacacccgggggtgaaatcgctccttaa
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