Leifsonia shinshuensis: F1C12_16715
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Entry
F1C12_16715 CDS
T06806
Name
(GenBank) response regulator transcription factor
KO
K07693
two-component system, NarL family, response regulator DesR
Organism
lse
Leifsonia shinshuensis
Pathway
lse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F1C12_16715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lse02022
]
F1C12_16715
Two-component system [BR:
lse02022
]
NarL family
DesK-DesR (membrane lipid fluidity regulation)
F1C12_16715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
HTH_Tnp_ISL3
HTH_IclR
Sigma70_r4
HTH_40
HTH_28
HTH_5
HTH_23
HTH_24
HTH_10
HTH_29
HTH_30
HTH_20
Phage_NinH
HTH_11
DUF6115
Motif
Other DBs
NCBI-ProteinID:
QNE36591
UniProt:
A0A7G6YDM6
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All DBs
Position
3447703..3448311
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AA seq
202 aa
AA seq
DB search
MTIRLLLADDQALVRGALAALLDLESDLEVVAQVGRGDEVLDAARATSADVALLDVEMPG
LDGIQVAAELARELPSCRSLIVTTFGRPGYLRRAMEAGAAGFIVKDTPSGQLADAVRRVA
SGLRVVDPALAAESLASGASPLTVREAEVLAVAGQGGTITDIARRLHLSDGTVRNHLSSA
IGKTGARNRSEAVAIATRQGWL
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgcctgctcctcgccgacgaccaggccctcgtccgcggcgcgctcgccgcc
ctgctcgacctcgagtccgacctggaggtcgtcgcccaggtcggccggggcgacgaagtc
ctcgacgcggcgcgcgcgacctccgccgatgtcgcgctgctcgacgtggagatgcccggg
ctggacggcatccaggtcgccgcggagctcgcgcgggagctcccgtcgtgccggtcgctg
atcgtgacgacgttcggacgtcccggctacctgcgccgggcgatggaggccggcgcggcc
ggcttcatcgtgaaggacacgccctccggccagctcgccgacgccgtccgccgcgtcgcc
tccgggctgcgcgtggtcgaccccgcgctcgccgccgagtcgctcgcgtcgggtgcgtca
ccgctgaccgtccgggaggccgaggtgctggccgtcgcgggccagggcgggacgatcacc
gacatcgcgcgccgcctccacctcagcgacgggacggtgcgcaaccacctgtccagcgcg
atcggcaagacgggcgcgcggaaccgctccgaggcggtcgcgatcgcgacgcggcagggg
tggttgtag
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