KEGG   Leifsonia shinshuensis: F1C12_16830
Entry
F1C12_16830       CDS       T06806                                 
Name
(GenBank) PDZ domain-containing protein
  KO
K08372  putative serine protease PepD [EC:3.4.21.-]
Organism
lse  Leifsonia shinshuensis
Pathway
lse02020  Two-component system
Brite
KEGG Orthology (KO) [BR:lse00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    F1C12_16830
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lse01002]
    F1C12_16830
Peptidases and inhibitors [BR:lse01002]
 Serine peptidases
  Family S1: chymotrypsin family
   F1C12_16830
SSDB
Motif
Pfam: Trypsin_2 Trypsin PDZ_2 PDZ PDZ_6 PDZ_Tricorn Abhydro_lipase
Other DBs
NCBI-ProteinID: QNE37787
UniProt: A0A7G6YH22
LinkDB
Position
complement(3477208..3478188)
AA seq 326 aa
MIAGGFAFAAITAGRSGACDAARVADEVLPSVVTIAVTSARGSSNGSGEIITEDGYILTN
NHVISDAASGAKLAVRFSDGHELPAELTGRDPKTDLAVIKVKTDEPLPVIATGDSGALVV
GQPVVALGAPLGLSSTVTAGIVSALGRTVPVPSDDDRNAILAGAIQTDASINPGNSGGAL
VDCAGRLVGINTAIATVPGSNGSASTGSVGIGFAVPEALALPIAHELIAHGEVAHPDAGL
TVVPIPPGAAAAFGVDGGLFVQSIVPGGPAQQAGLRVGDVITAVNGNPATDIDVLTAIQV
TSKAGDEVKVDYLRDGAAHTTTLTLR
NT seq 981 nt   +upstreamnt  +downstreamnt
atgatcgccgggggcttcgcgttcgccgcgatcaccgccggccgctccggcgcctgcgac
gccgcccgggtcgcggacgaggtgctgccgagcgtggtcaccatcgccgtcacgagtgca
cggggctcgagcaacggcagcggcgagatcatcaccgaggacggctacatcctcacgaac
aaccacgtgatctccgacgcggcgtcgggcgcgaaactcgcggtgcggttcagcgacggc
cacgagctgcccgcagagctcaccggccgcgacccgaagaccgacctggccgtcatcaag
gtgaagaccgacgagccgctcccggtcatcgcgacgggggactccggcgcgctggtggtc
gggcagccggtggtcgcactcggcgccccgctcggcctctcctcgaccgtgacggccggc
atcgtcagcgcgctcgggcggaccgtcccggtgccgagcgacgacgacaggaacgccatc
ctcgccggcgccatccagaccgacgcctcgatcaacccgggcaactcgggaggcgcgctg
gtcgactgcgcggggcgcctggtcggaatcaacacggccatcgcgaccgtccccggctcc
aacggctcggcgagcaccggcagcgtcgggatcggcttcgccgttccggaggcgctggcg
ctgccgatcgcgcacgagctgatcgcgcacggcgaggtcgcgcatccggacgccgggctc
accgtggtgccgatcccgccgggcgcggcggcggcgttcggagtggacggcggactgttc
gtgcagtcgatcgtgccgggcggtcccgcgcagcaggccggcctgcgggtcggggacgtg
atcaccgcggtgaacggcaacccggcgaccgacatcgacgtgctgacggcgatccaggtc
accagcaaggcgggcgacgaggtgaaggtcgactacctccgcgacggcgccgcgcacacg
acgacgctcacgctccgctga

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