Leifsonia shinshuensis: F1C12_17140
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Entry
F1C12_17140 CDS
T06806
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lse
Leifsonia shinshuensis
Pathway
lse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F1C12_17140 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lse03019
]
F1C12_17140 (recQ)
03400 DNA repair and recombination proteins [BR:
lse03400
]
F1C12_17140 (recQ)
Enzymes [BR:
lse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F1C12_17140 (recQ)
Messenger RNA biogenesis [BR:
lse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F1C12_17140 (recQ)
DNA repair and recombination proteins [BR:
lse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F1C12_17140 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QNE36668
UniProt:
A0A7G6YDV3
LinkDB
All DBs
Position
3545749..3547761
Genome browser
AA seq
670 aa
AA seq
DB search
MSWNTWEPDDREAPPFDEPPFDVEPPLPDFGDDPYADVPFTDAPPAASAGSAASSAGAPR
TPQATPARFDSPAEALRTVFGYDSFRGQQAAIIDRVVAGGDAVVLMPTGGGKSLCYQIPS
LVREGTGVVVSPLIALMQDQVDALTAVGVRAAFLNSTQDAGQRSAVERAYLAGELDILYV
APERLSSEATKRFLEGGRVALFAIDEAHCVSQWGHDFRPDYLALSELADRWPGVPRIALT
ATATEATHRELTERLHLQDAEHFVSDFDRPNIQYRIVPKVEVRKQLLDFITGEHPGEAGI
VYALSRNSVERTAEFLAGRGLTALPYHAGLDAQTRARTQARFLREDGVIVVATIAFGMGI
DKPDVRFVAHIDLPKSVEGYYQETGRAGRDGLPSTTWLAYGLQDVVQQRRMIDESPGDLA
HRRRLTQHLDAMLALCETVQCRRVNLLNYFGQRATPCGNCDTCLTPPETWDGTVPAQKLL
STVVRLQRERNQRFGAGHLIDILRAKRTPRVDQYGHDKLSTWGLGEDLGESQWRGVVRQL
IAQELLKPEGEYGVLTLTPASSEVLSGGREVVLRREPERAARSSRSGRSAAPADLAPADA
GLFEALRAWRAGEAKTQGVPAYIVFGDATLRAVAAARPSSLADLDGISGIGAKKKETYGE
ALLEVVAGEA
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagctggaacacgtgggagcccgacgaccgggaggcgccgcccttcgacgagcctccg
ttcgatgtcgagcctccgctgcccgatttcggcgacgacccgtatgcggacgtgccgttc
acggacgcgccgccggcggcgtcggcgggctccgccgcgtcttccgccggcgccccgcgg
actccgcaggcgacgcccgcgcgcttcgactctcccgccgaggcgctgcgcaccgtgttc
ggctacgactccttccgcgggcagcaggcagcgatcatcgaccgcgtcgtggcgggaggc
gacgccgtcgtgctcatgccgaccggcggcggcaagtcgctctgctaccagatcccgtcc
ctggtccgcgagggcacgggtgtcgtcgtgtcgccgctcatcgcgctgatgcaggaccag
gtcgacgcgctgaccgccgtcggcgtgcgcgcggcgttcctcaactcgacccaggacgcc
gggcagcgttcggccgtggagcgcgcctacctcgcgggcgagctcgacatcctctacgtc
gcgccggagcgcctgtcgagcgaggcgaccaagcgcttcctcgaaggcggccgcgtcgcg
ctgttcgccatcgacgaggcgcactgcgtctcccagtggggccacgacttccggcccgac
tacctggcgctctccgagctggcggaccggtggccgggggtcccgcgcatcgccctgacc
gcgaccgcgaccgaggcgacccaccgcgagctcactgagcggctgcacctgcaggacgcc
gagcacttcgtctccgacttcgaccgcccgaacatccagtaccgcatcgtgccgaaggtg
gaggtccgcaagcagctgctcgacttcatcaccggcgagcacccgggcgaggccggcatc
gtctacgcgctgtcccgcaactcggtggagcgcacggccgagttcctggccggccgcggc
ctcaccgccctgccgtaccacgccggtctcgacgctcagacccgggcgcgcacccaggcg
cgcttcctgcgcgaggacggcgtgatcgtggtcgcgaccatcgcgttcggcatgggcatc
gacaagccggacgtgcggttcgtcgcccacatcgacctcccgaagtcggtcgagggctac
taccaggagaccggccgagccggccgcgacggcctcccgtcgaccacctggctggcttac
gggctgcaggacgtcgtgcagcagcgccggatgatcgacgagtcccccggcgacctcgcc
caccgccgccggctgacccagcacctggacgcgatgctcgcgctgtgcgagacggtccag
tgccgccgcgtgaacctgctgaactacttcggacagcgcgcgaccccgtgcggcaactgc
gacacctgcctcaccccgccggagacctgggacggcacggtccccgcccagaagctgctc
tcgacggtcgtccgcctccagcgcgagcgcaaccagcgcttcggcgccggccacctcatc
gacatcctccgtgccaagcgcaccccgcgcgtcgaccagtacggccacgacaagctctcc
acctggggcctcggcgaggacctcggcgagagccagtggcgcggcgtcgtccgccagctg
atcgcgcaggagctgctgaagcccgagggcgagtacggcgtcctcacgctgaccccggcg
agctccgaggtgctgtccggtggccgggaggtcgtcctgcgccgcgagcccgagcgcgca
gcccgctcctcccgcagcggccgctccgcggcgccggccgacctggcgcccgccgacgcc
ggcctcttcgaggcgctgcgcgcctggcgagcgggcgaagcgaagacccagggggtgccc
gcgtacatcgtcttcggcgacgcgacgctgcgcgcggtcgccgccgcacgcccgtcctcc
ctcgccgacctcgacggcatcagcggcatcggcgcgaagaagaaggagacgtacggcgag
gcgctgctggaggtggtggcgggggaagcctag
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