Leifsonia shinshuensis: F1C12_18605
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Entry
F1C12_18605 CDS
T06806
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
lse
Leifsonia shinshuensis
Pathway
lse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F1C12_18605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lse02000
]
F1C12_18605
Transporters [BR:
lse02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
F1C12_18605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QNE36925
UniProt:
A0A7G6YEL0
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All DBs
Position
3839442..3841100
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AA seq
552 aa
AA seq
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MNKSRTRLRRSLVALAAAASLLAMSACSLQTSGSNNNSGSASGSLLFGADGGNPTFVRNF
NPFSPNTRTGAHYMYEPLQVVNSIDGKATPFLATGDKVVDPKTIQYTIRKGVNWSDGTPF
TPADVVYTFDLIKKTSALDLLGQWQNIDTISSSGDTVTFHLKSPNVPAASIIDQQIIVPE
HIWKSVKDPVTWTNEKPVATGPYVVGTFAPNQYTMVKNTKYWQADKVAAEKLVLPASNTG
LQLVKNGYDWAYSFIDNVDKTWVGANKQHNKYWFPPGGTISLMPNLTKAPFNNLDFRMGL
SYSLDRDKIAQDAEEGYVKAAGQNGLLLPNSQQWLNSSLPNQGMITQDTQKALASFAKAG
YTQKGGKLVDAAGQQLQLTITTPNGYADWLRGVQAVQAQLQAIGIAVTIDQPQPAAYTQA
QNNGDFQLLMGAFGGAGSVYQDFNTLMSSEFLKPVGTSTSGNFERFSDPQADSLLQQLRS
ATSTSDQKKYIDQLQQVMYDKVPVISMFYGGLWGLFSDKAFTGWPSSSDPYATPATWTEN
SLLILTHLTKAK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtccagaacgcgcctccggcgttcgctcgtcgcactcgccgcagcagcgtca
ctgctcgcgatgagcgcctgcagcctccagacctccgggtcgaacaacaactcgggctcc
gcaagcggctccctcctgttcggggccgacggcggcaacccgacgttcgtccgcaacttc
aacccgttctccccgaacacccgcaccggcgcgcactacatgtacgagccgctccaggtc
gtcaactccatcgacggcaaggcgaccccgttcctcgcgaccggcgacaaggtggtcgac
cccaagaccatccagtacacgatccgcaagggcgtgaactggtccgacggcacgccgttc
accccggcggacgtcgtctacaccttcgacctcatcaagaagacctcggcgctcgacctg
ctcggccagtggcagaacatcgacacgatcagctcgtccggcgacaccgtcacgttccac
ctgaagagcccgaacgtgccggccgcgagcatcatcgaccagcagatcatcgtgccggag
cacatctggaagtccgtgaaggacccggtgacctggaccaacgagaagccggtcgccacc
ggcccgtacgtggtcggcaccttcgcgccgaaccagtacacgatggtgaagaacacgaag
tactggcaggccgacaaggtcgcggcggagaagctggtgctcccggcctccaacaccggc
ctccagctcgtcaagaacggctacgactgggcctactcgttcatcgacaacgtcgacaag
acgtgggtcggcgcgaacaagcagcacaacaagtactggttcccgcccggcggcaccatc
tcgctgatgccgaacctcaccaaggcgccgttcaacaacctcgacttccggatgggcctc
agctactccctcgaccgcgacaagatcgcccaggacgctgaggagggctacgtgaaggcc
gcgggccagaacggcctgctcctgcccaactcgcagcagtggctcaactcgtcgctgccg
aaccagggcatgatcacgcaggacacccagaaggcgctcgcctcgttcgccaaggccgga
tacacgcagaagggcggcaagctcgtcgacgccgccggccagcagctccagctcacgatc
accacgccgaacggctacgccgactggctgcgcggtgtgcaggccgtccaggcgcagctc
caggcgatcgggatcgcggtgacgatcgaccagccgcagcccgccgcgtacacgcaggcg
cagaacaacggcgacttccagctcctgatgggcgcgttcggcggcgccggcagcgtctac
caggacttcaacaccctgatgagcagcgagttcctgaagcctgtcggcacctcgacgtcc
ggcaacttcgagcggttcagcgacccgcaggcggactcgctgctccagcagctgcggtcg
gccacctcgacgagcgaccagaagaagtacatcgatcagctccagcaggtcatgtacgac
aaggtgcccgtcatcagtatgttctacggcggcctgtggggcctgttcagcgacaaggcc
ttcaccggctggccgagctcgagcgacccgtacgccaccccggccacctggaccgagaac
tcgctgctgatcctcacccacctcacgaaggcgaagtga
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