Leifsonia shinshuensis: F1C12_20055
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Entry
F1C12_20055 CDS
T06806
Name
(GenBank) hypothetical protein
Organism
lse
Leifsonia shinshuensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
HTH_38
AAA_16
TPR_4
HTH_23
AAA_22
AAA_29
AAA
HTH_24
HTH_40
Motif
Other DBs
NCBI-ProteinID:
QNE37180
UniProt:
A0A7G6YFB5
LinkDB
All DBs
Position
complement(4138928..4141348)
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AA seq
806 aa
AA seq
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MIDPRAAASALLAGRERILALVRELLFSSDADVDLVGPRHSGRSTVVDAVASSAVDARRT
VLRVNGVRSLRESPLAALHAAGFGVVPSGERRTASPLQQAIDALTAVLGSGPAALLLDDA
DLLDDASTGAIDAVRRATRTPVLRTRARMDDGSSAAYVIELEPLEYGELRSVVVERLGAP
VDPGAMSRVYSLCGGNVGLALALTELAVLEGRLALRSGAWCATGELWSRSLRGALEGQLS
GLAAAERAALERIAVTGAGDVASTRGLVDPVALDGLAAAGVLRIVPHRGRRLIALDPPVL
GAHLRDRAQVDAPRTDAAFVQFVHAAADSLREESAAAWRERPEPATALGLARALMADTGL
APGCGAELDAVLTASAELPGDPLDVAELAVLRARRSVALGAAPGAAVDALRAEIAGLGPF
ERLADAAAVMLAVEIGAEPAVQEERLRDDPDLPPPVRSRLIEAARAVALRRGRFEDAVRL
LDTLAAVPGASASSREAAAHAYALLGAGRHADAVAWAERGAAAARERLDAGAVREHSVAL
GLCHLLADRPTDAAGALTTASALGTPAVPGAAIQVALNVLTAVIAVRRGDTSLAERIRDE
LAAGLPASSGEGAPSAVRVGVQWVEAQLAAGRGRPDEAAELLRELSSTLSLHGELPTAAL
ALLTSLEHAIDDAGLEEARALLERQQSELHDAHLAFVRARAEPGGVDLPALAERLASTGR
AGPAAALQCPTGEATDSGGFFSTPIALTDREREITRLVAAGLSNPEIASRLVLSVRTVES
HVSRVMRKTSAANRGELVALAVRLAP
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatccccgcgccgcggcgtccgctctgctcgcgggcagagagcggatcctcgcg
ctcgtgcgcgagctcctgttctccagcgacgccgacgtcgatctggtcggtccccggcac
agcgggcgctcgacggtggtcgacgccgtggcgtcctcggcggtcgacgcgcgccgaacg
gttctgcgcgtgaacggcgtccgctcattgcgggagagcccgctcgcggccctccacgcc
gccggattcggggtcgtcccctccggcgagcgccgtaccgcctctcccctgcagcaggcc
atcgacgccctcacggccgtgctcgggtccggtccggcggcgctcctgctggacgacgcg
gacctcctggacgacgcctcgaccggcgcgatcgacgccgtgcgccgcgcgacgcgcaca
cccgtgctgcgcacccgcgcccgcatggacgacgggtcgtcggccgcctacgtgatcgag
ctggagccgctcgagtacggcgagctgcggtcggtcgtggtcgagcggctcggcgcgccg
gtcgatccgggtgcgatgagccgcgtgtactccctctgcggcggcaacgtcggcctcgcg
ctcgcgctcaccgagctcgccgtcctcgagggccggctcgccctccgctccggcgcgtgg
tgtgcgaccggagagctgtggagcagatcgctccgcggcgccctcgaagggcagctctcc
gggctcgccgcggccgagcgcgcggcgctcgaacggatcgccgtgaccggcgccggcgat
gtggcctcgacgcgcggcctggtcgaccccgtcgccctggacgggctcgccgcggccggc
gtcctccggatcgtgcctcatcgcgggcgcaggctgatcgctctcgacccgccggtgctg
ggagcccatcttcgtgaccgcgcccaggtggacgcgccgcgcacggacgcggcgttcgtg
cagttcgtgcacgccgccgcggactccctccgcgaggagtcggcggcggcctggcgcgag
cggcccgagccagcgacggcactcgggctcgcgcgcgccctgatggcggacaccggtctg
gcgcccggctgcggggccgagctggacgccgtgctgaccgcctccgcggaactgccgggc
gatccgctcgacgtggcggagctcgccgtgctccgcgcccgccgatcggtcgccctcggc
gcggcgcccggcgccgccgtcgacgcgctgcgcgcggagatcgccgggctcggcccgttc
gagcggctggccgacgccgcagcggtcatgctcgccgtggagatcggcgccgagccggct
gtgcaggaggagcggctgcgcgacgaccccgatcttccgcctcctgtccgctcccggctg
atcgaggcggcccgcgccgtcgccctgcggcgtggacggttcgaggacgcggtccgactc
ctcgacacgctcgccgcggtgcccggcgcgtccgcgtcctcccgcgaggccgccgcgcac
gcgtatgcgctcctcggcgcggggcggcacgccgacgccgtcgcctgggccgaacgcggc
gcggccgccgcccgcgaacgtctcgacgccggcgcggtgcgcgagcacagcgtcgcactc
gggctctgccatctgctcgccgaccgccccaccgacgcggccggcgcgctcacgacggcg
tcggcgctcggcacgccggccgtccccggcgcggcgatccaggtcgcgctcaacgtcctc
acggccgtgatcgccgtgcggcggggcgacacgtcgctcgccgagcgcatccgcgacgag
ctcgccgccgggctccccgcgtcgtccggcgaaggcgcgccgtccgccgtgcgggtgggg
gtgcagtgggtcgaggctcagctcgccgccgggcgggggcgccccgacgaggccgccgaa
ctgctccgcgagctctcgtccaccctttcgctgcacggcgagctgcccacggccgcgctc
gcactgctgacgtcgctcgagcacgcgatcgacgacgcggggctggaggaagcgcgcgcg
ttgctcgagcgtcagcagtccgagctccacgacgctcacctcgcgttcgtccgtgcccgt
gcggagcctggcggggtggacctccccgcgctcgcggaacgtctcgccagcaccggccgg
gccgggccggccgcggcgcttcagtgcccgacgggagaggccacggacagcggggggttc
ttctcgacgccgatcgccctgaccgatcgcgagcgcgagatcaccagacttgtggccgcc
gggctcagcaatccggagatcgcctcccggctcgtcctcagcgtccgcaccgtggagagc
cacgtcagcagggtgatgcgcaagacctcggcggcgaaccgcggcgagctggtggcgctg
gcggtgcggctcgcgccgtag
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