Leifsonia shinshuensis: F1C12_20260
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Entry
F1C12_20260 CDS
T06806
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
lse
Leifsonia shinshuensis
Pathway
lse00190
Oxidative phosphorylation
lse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
F1C12_20260
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F1C12_20260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lse03019
]
F1C12_20260
Enzymes [BR:
lse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
F1C12_20260
Messenger RNA biogenesis [BR:
lse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
F1C12_20260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QNE37217
UniProt:
A0A7G6YFF2
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All DBs
Position
complement(4179734..4181947)
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AA seq
737 aa
AA seq
DB search
MDGERTALDNGLLDNGLSGSLGSDFDDDFAPFIYEPDPTLPDDRYLDRELSWLAFNQRVL
ELAEDPLLPVLERANFLAIFASNLDEFFMVRVAGLKRRIATGLAVPTNVGRAPQDVLADI
SEKAHVLQVRHAKAYRELVLPALEAAGITVSSWDELDEADRVQMREVFSQQIFPVLMPLA
VDPAHPFPYISGLSLNLSVRVRNSRTGKEQFARLKVPQMLPRFVRIDQREGLGQVRFLRL
EDLIANHLGDLFPGMEILDHHVFRVTRNEDVEIDEDETENLIQALERELLRRRFGPPIRL
EVTDDMDDVTLGLLVRELDVTEQEVYRLPAPLDLGGLFDLARIDRPDLHYPNHVPTTAPQ
LMPSEPNAKPDVFAAVARQDILLHHPYESFATSVQAFLEQAAADPHVLAIKQTLYRTSGD
SPIVEALIDAAEAGKQVLALVEIKARFDEQNNISWARKLEKAGVHVVYGLVGLKTHCKLA
LVIREEKGVLKHYSHIGTGNYNPKTSRIYEDLGLLTADDQVGKDLTRLFNELSGYAIEKK
FKRLLVAPLHLRKGLLKRIDTEAANAAAGRPSGIRIKLNSIVDEAIIDALYRASQAGVPV
ELWVRGICGLVPGREGLSENIRVRSVLGRYLEHSRVFSFVNDGDPHVYIGSADMMHRNLD
RRVEALVRLADPEHLAELDRLFDLAFDERTAAWTLAEDGVWTRRHLDENGAPLTDLQTKL
QQQAAHRPRSSRTGTRR
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgagcgcactgcactggacaacggcctactcgacaacgggctgagcggcagc
ctgggcagcgacttcgacgacgatttcgcccccttcatctacgagccggacccgacgctg
ccggacgaccgctacctcgaccgcgagctgagctggctggcgttcaaccagcgcgtgctg
gagctcgcggaggacccgctgctgcccgtcctggagcgcgccaacttcctcgcgatcttc
gccagcaacctcgacgagttcttcatggtccgggtcgccgggctcaagcgccgcatcgcg
accgggctcgcggtcccgaccaatgtcggacgggccccgcaggacgtcctggccgacatc
tccgagaaggcccacgtgctccaggtccggcacgccaaggcgtaccgcgagctcgtgctg
cccgcgctggaggccgcgggcatcaccgtgtcgtcgtgggacgagctggacgaggccgac
cgcgtgcagatgcgcgaggtgttctcgcagcagatcttccccgtgctcatgccgctcgcg
gtcgacccggcgcacccgttcccctatatctccggcctgtcgctgaacctctcggtgcgc
gtgcgcaactcgcgcaccggcaaggagcagttcgcgcgcctcaaggtgccgcagatgctg
ccgcgcttcgtgcgcatcgaccagcgcgaggggctcgggcaggtgcgcttcctgcgtctg
gaggacctgatcgccaaccacctcggcgacctcttccccggcatggagatcctcgaccac
cacgtcttccgggtcacccgcaacgaagacgtcgagatcgacgaggacgagaccgagaac
ctcatccaggcgctggagcgcgagctgctgcgccgccggttcgggccgcccatccggctc
gaggtcaccgacgacatggacgacgtcacgctcggactcctggtgcgcgagctcgacgtc
accgagcaggaggtctaccgcctccccgcaccgctggacctcggcggcctgttcgacctg
gcgcgcatcgaccggccggacctgcactatcccaaccacgtgccgaccacggcgccgcag
ctcatgccgagcgagccgaacgccaagccggacgtcttcgccgccgtcgcgcgccaggac
atcctgctgcaccacccgtacgagtcgttcgcgacgagtgtgcaggccttcctcgagcag
gcggcggccgacccgcacgtcctcgccatcaagcagacgctgtaccgcacctcgggcgac
agcccgatcgtggaggccctgatcgacgccgccgaggccggcaagcaggtgcttgccctg
gtcgagatcaaggcgcggttcgacgagcagaacaacatctcctgggcgcgcaaactcgag
aaggccggcgtgcacgtcgtctacgggctggtcgggctcaagacgcactgcaagctcgcg
ctggtcatccgcgaggagaagggcgtcctcaagcactacagccacatcggcacgggcaac
tacaaccccaagacctcccgcatctacgaagacctcggcctgctgacggcggacgaccag
gtgggcaaggacctcacccggcttttcaacgagctgtccggctacgcgatcgagaagaag
ttcaagcgcctcctggtcgcgccgctgcacctccgcaaggggctgctgaagcgcatcgac
accgaggcggcgaacgccgcggccggccggccctccggcatccgcatcaagctcaactcc
atcgtggacgaggcgatcatcgatgccctgtaccgcgccagccaggccggcgtgccggtg
gagctgtgggtgcgcggcatctgcgggctggtccccgggcgcgaaggcctctccgagaac
atccgggtccggtcggtgctcggccggtatctcgagcactcgcgcgtgttctcgttcgtg
aacgacggcgacccgcacgtctacatcggcagcgccgacatgatgcatcgcaacctcgac
cgtcgtgtcgaggcgctggtgcgcctggccgaccccgagcacctcgccgagctcgaccgc
ctgttcgacctcgcgttcgacgagcgcaccgcggcgtggacgctcgcggaggacggcgtc
tggacccgccgccacctcgacgagaacggcgcgccgctcaccgacctccagaccaagctg
cagcagcaggccgcccaccggccgcgttcgtcccgcacgggaaccaggcggtga
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