Leifsonia shinshuensis: F1C12_21260
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Entry
F1C12_21260 CDS
T06806
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lse
Leifsonia shinshuensis
Pathway
lse00061
Fatty acid biosynthesis
lse00071
Fatty acid degradation
lse01100
Metabolic pathways
lse01212
Fatty acid metabolism
lse02024
Quorum sensing
lse04146
Peroxisome
Module
lse_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
F1C12_21260
00071 Fatty acid degradation
F1C12_21260
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
F1C12_21260
09145 Cellular community - prokaryotes
02024 Quorum sensing
F1C12_21260
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lse01004
]
F1C12_21260
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lse04147
]
F1C12_21260
Enzymes [BR:
lse01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
F1C12_21260
Lipid biosynthesis proteins [BR:
lse01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
F1C12_21260
Exosome [BR:
lse04147
]
Exosomal proteins
Exosomal proteins of breast milk
F1C12_21260
Exosomal proteins of breast cancer cells
F1C12_21260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF6380
Motif
Other DBs
NCBI-ProteinID:
QNE37384
UniProt:
A0A7G6YFW9
LinkDB
All DBs
Position
4374433..4376031
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AA seq
532 aa
AA seq
DB search
MPHGYATMSVASILAETAHRMPDNVALIFNGQEIAYRDLWDQTRRYAGALRDLGVGPGDR
VALMIPNVPDFPRAYYAVLALGAVVVPIHALLKGQEIEYVLRDSASKLLICAAPLLAEGA
KGAALAGVDTLSVLVPDELVEQLPFPRLEDAAEGAEPIDTYVPRDPVDTATILYTSGTTG
KPKGAEGCHFALVEQVNVLLSGTFDFEATDRVLGCLPLFHTFGQTCVMNMGFRAGAAIVL
VPKFDGATALQLLNAHACTIMTGVPTMYIALLEAAKTNPERPPLRYGLSGGAAIPVAVIE
RMKEVYGIDIHEGYGLTETSPVASFNHRGKPTRVGTVGQPIWGVDVEIADPEVDDAIHLL
PRGELGEIVIRGHNLMKGYLNLPEANAEAVVDGWFRTGDLGTKSDDDYITIVDRKKDMIV
RNGYNVYPREVEEALSTHPAVALVAVFGVAHDTHGQEIMAAVTLMPGGEATAEELVVFAR
ERVAAYKYPRRVEILETLPLGPSGKVLKRELVARFEIIPAPEGHVDAPKTAV
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacggctacgccaccatgtccgtcgccagcatcctggccgagaccgcgcaccgg
atgcccgacaacgtggcgttgatcttcaacggccaggagatcgcctaccgcgacctctgg
gaccagacccgccgctacgccggagcgctgcgcgacctcggcgtcgggccgggggaccgg
gtggcgctcatgatcccgaacgtgcccgacttcccgcgcgcctactacgcggtgctggca
ctcggtgcggtcgtcgtccccatccacgccctcctcaagggccaggagatcgagtacgtg
ctccgcgactccgcctcgaagctcctgatctgcgccgcgccgctgctggccgagggcgcg
aagggcgcggcgctcgccggggtcgacaccctctcggtgctggtgccggacgagctggtc
gagcagctgccgttcccgcggctggaggacgcagcggaaggcgccgagccgatcgacacc
tacgtgccgcgcgacccggtggacaccgcgaccatcctctacaccagcggcacgaccggc
aagccgaagggggcggagggctgccacttcgctctcgtggagcaggtgaacgtgctgctc
tccggcaccttcgacttcgaagcgacggaccgcgtcctcggctgtctcccgctcttccac
acgttcgggcagacctgtgtcatgaacatggggttccgcgcgggcgccgcgatcgtgctc
gtgccgaagttcgacggcgcgaccgcattgcagctgctcaacgcgcacgcctgcaccatc
atgaccggcgttccgacgatgtacatcgccctgctggaggccgccaagaccaacccggag
cgcccgccgctgcgttacggcctgagcggcggcgcggccatccccgtggccgtcatcgag
cggatgaaggaggtctacggcatcgatatccacgagggctacggcctcaccgagacctcg
ccggtcgcgtccttcaaccaccgcgggaagccgaccagggtcggcacggtcggccagccg
atctggggagtggacgtcgagatcgccgacccggaggtggacgacgccatccacctgctg
ccgcgcggcgagctgggcgagatcgtgatccgcggccacaacctcatgaagggctacctc
aacctcccggaggcgaacgcggaggccgtcgtggacggctggttccgcaccggcgacctc
ggcaccaagagcgacgacgactacatcacgatcgtggaccgcaagaaggacatgatcgtg
cgcaacggctacaacgtgtacccgcgcgaggtggaggaggcgctgtcgacgcatcccgct
gtcgcgctggtcgcggtgttcggcgtcgcgcacgacacgcacgggcaggagatcatggct
gcggtcacgctgatgccgggcggcgaagcgacggcggaggagctggtcgtgttcgcccgg
gagcgcgtggccgcctacaagtacccgcgtcgcgtggagatcctggagacccttccgctc
ggcccgagcggaaaggtcctgaagcgcgagctcgtcgcccgcttcgagatcatccccgcc
cccgaggggcacgtagacgcccctaaaaccgcggtttaa
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