Agrilutibacter solisilvae: I8J32_005630
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Entry
I8J32_005630 CDS
T10348
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
lsf Agrilutibacter solisilvae
Pathway
lsf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I8J32_005630 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsf03019
]
I8J32_005630 (rhlB)
Enzymes [BR:
lsf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I8J32_005630 (rhlB)
Messenger RNA biogenesis [BR:
lsf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I8J32_005630 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RhlB
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QSX79348
UniProt:
A0A974Y157
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All DBs
Position
1295123..1296928
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AA seq
601 aa
AA seq
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MSDKPLTDITFDSFELHPSLLAGLEAAGFTRCTPIQALTLPLALNGRDVAGQAQTGTGKT
LAFLVAVVNRLLTRPALAERKPEDPRALILAPTRELAIQIHKDAVKFGSELGLKFALVYG
GVDYDKQRDLLQKGADVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDI
RFLLRKMPERTTRQTLLFSATLSHRVLELAYEHMNEPEKLVVESEFITNAKVRQMMYYPS
DEEKLPLLIGLLSRSEGARTMVFVNTKAFVERVARALERAGYRVGVLSGDVPQKKRESLL
KKFQAGQLEILVATDVAARGLHIDGVSHVYNYDLPFDAEDYVHRIGRTARLGAEGDAISF
ACERYAMSLPDIEAYIEQKIPTTPVDADLLVPLPRPVRELPAAGADDEEEESIGAIFKEA
REQRAADEERRGGGRGHGGKPGGGRREGGPRGAPRDASRGPRRERPAGEAVAGHAVAAGE
QAAATAAAPRPPRPPRPEGATTPAVEGEHAPRKRRRRRGGRRIDGGEAAVTTASAAPVAP
MQVKASQPGRDKPAHDKAAAQKGAHQKGTHEKGASEPKAGLLSRLGRGLKKLVTRAPSSQ
H
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaagcccctcaccgatatcacgttcgattcgttcgaactgcacccctccctg
ctcgcaggcctcgaagccgccggcttcacccgctgcacgcccatccaggccctcaccctg
ccgctggccctgaacgggcgcgacgtcgccggccaggcccagaccggcaccggcaagacg
ctggccttcctggtggcggtcgtgaaccgcctgctgacccgtccggccctggccgagcgc
aagcccgaggacccgcgcgcgctcatcctggcgcccacccgcgagctggccatccagatc
cacaaggacgcggtgaagttcggctccgagctgggcctgaagttcgccctggtctacggc
ggcgtcgactacgacaagcagcgcgacctgctgcagaagggcgccgacgtcatcatcgcc
acgcccggccgcctgatcgactacgtcaagcagcacaaggtggtctcgctgcatgcctgc
gagatctgcgtgctcgacgaagccgaccgcatgttcgacctgggcttcatcaaggacatc
cgcttcctgctgcgcaagatgcccgagcgcaccacgcggcagacgctgctgttctcggcc
acgctcagccaccgggtgctggagctggcctacgagcacatgaacgagccggagaagctc
gtcgtggagtcggagttcatcaccaacgccaaggtcaggcagatgatgtactacccctcc
gacgaggagaagctgccgctgctgatcggcctgctctcgcgcagcgagggcgcccgcacg
atggtgttcgtcaacaccaaggccttcgtcgagcgcgtggcgcgtgcgctggaacgcgcc
ggctaccgcgtcggcgtgctctccggcgacgtgccgcagaagaagcgcgagtcgctgctg
aagaagttccaggccggccagctggagatcctggtggccaccgacgtggccgcgcgcggc
ctgcacatcgacggcgtgtcgcacgtctacaactacgacctgcccttcgacgcggaagac
tacgtccatcgcatcggccgcaccgcgcggctgggcgccgaaggcgacgcgatcagcttc
gcctgcgagcgctacgcgatgtcgctgcccgacatcgaggcctacatcgagcagaagatc
ccgaccacgcccgtcgacgccgacctgctggtcccgctgccgcgcccggtccgcgagctg
cccgccgctggcgcggacgacgaggaagaggaaagcatcggcgccatcttcaaggaagcg
cgcgaacagcgcgcggccgacgaggagcgtcgtggcggtggccgcggccatggcggcaag
cccggtggcggccgtcgcgaaggcggtccgcgcggcgctccgcgtgatgcctcccgcggc
ccgcgccgggagcgtccggccggcgaggccgtggccggccatgcagtcgccgcgggcgag
caggccgctgcaaccgcggccgcgccgcgtccgccgcgcccaccgcgtccggaaggcgcc
accacgccggccgtcgaaggcgagcacgcgccgcgcaagcgccgtcgccgtcgcggcggt
cgccgcatcgacggtggcgaggcggccgtgaccacggcctccgccgcacccgtcgccccg
atgcaggtcaaggcgtcccagccgggccgcgacaagccggcgcacgacaaggccgcggct
caaaagggcgcgcatcagaagggcacgcacgagaagggcgcgtccgagccgaaggccggc
ctgctgtcgcgcctgggtcgtggtctgaagaagctcgtcacccgcgcgcccagctcgcag
cactga
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