Agrilutibacter solisilvae: I8J32_013940
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Entry
I8J32_013940 CDS
T10348
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
lsf Agrilutibacter solisilvae
Brite
KEGG Orthology (KO) [BR:
lsf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsf03009
]
I8J32_013940 (dbpA)
Enzymes [BR:
lsf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
I8J32_013940 (dbpA)
Ribosome biogenesis [BR:
lsf03009
]
Prokaryotic type
rRNA helicases
I8J32_013940 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
AAA_22
SLFN-g3_helicase
Helicase_RecD
SWI2_SNF2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QSX77814
UniProt:
A0A975AS89
LinkDB
All DBs
Position
3176709..3178085
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AA seq
458 aa
AA seq
DB search
MTEFTDLPLNPALFQGLDALGHVQMTPIQAQGLPALLEGRDLIAQAPTGSGKTAAFGLAL
LHRIDVAQTRLQALVLCPTRELADQVAKHIRKLATGLPNVKVTTLTGGTALAPQLASLGQ
HAPHVVVGTPGRIQELLRKRVLDLRDIHVVVLDEADRMLDMGFEEPIREILGRTPGKRQT
LLFSATYPDAIRAIASQYQRDPLVVTVEGSEQPTTIVQRFFDVDPAQKPSALAGLLLEYA
PESAVVFCNMKRDIEDVVASLTHLGFSALALHGDMEQRDRDEVLVRFANRSCNVLVASDV
AARGLDIDDLGAVVNYDVPTDVDTYTHRIGRTGRAGREGLALTLCTPREMPRANALSSQL
GSPIRWERPVLATLQARIAPRATAVTLCIDAGKTDKLRPGDIVGAITGDAGLPGDAIGKI
DVYATRSYVAIARPHADKALARLQAGKIKGRKFRIRKL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaattcaccgacctgcccctcaacccggcacttttccaggggctggacgcgctg
ggccacgtgcagatgaccccgatccaggcccagggcctgcccgccctgctcgagggccgg
gacctgatcgcccaggcgcccaccggcagcggcaagacggccgccttcggcctggccctg
ctccatcgcatcgacgtcgcccagacccgcctgcaggccctggtgctgtgccccactcgc
gaactggccgaccaggtcgccaagcacatccgcaagctcgccaccggcctgcccaacgtc
aaggtgaccacgctcaccggcggcaccgcgctggcgccgcaactggcgtcgctgggccag
cacgccccgcatgtcgtggtcggcacgcccggacgcatccaggaactgctgcgcaagcgc
gtgctggacctgcgcgacatccacgtggtcgtgctcgacgaggccgaccgcatgctggac
atgggcttcgaggagcccatccgcgagatcctgggccgcacgccgggcaagcggcagacc
ctgctcttctcggccacctaccccgacgccatccgcgccatcgccagccagtaccagcgc
gatccgctggtggtgaccgtggaaggcagcgagcagccgaccacgatcgtgcagcgcttc
ttcgacgtcgacccggcccagaagccctcggcactggccggcctgctgctggaatacgca
cccgagtcggcggtggtgttctgcaacatgaagcgcgacatcgaggatgtcgtcgcctcg
ctcacccacctgggcttctccgcgctggcgctgcacggcgacatggagcagcgcgaccgc
gacgaggtgctggtgcgcttcgccaaccgcagctgcaacgtgctggtggccagcgacgtg
gccgcgcgcgggctggacatcgacgacctgggcgcggtggtcaactacgacgtgccgacc
gacgtcgacacctacacccaccgcatcgggcgcaccggccgcgccggccgcgagggcctg
gcgctcacgctgtgcacgccgcgcgaaatgccgcgggccaacgcgttgtcctcgcagctg
ggctcgccgatccgctgggaacgcccggtgctggccacgctgcaggcccgcatcgcgcca
cgcgccacggcggtgacgctgtgcatcgacgcgggcaagaccgacaagctgcgtccgggc
gacatcgtcggcgcgatcaccggcgatgccggcctgcccggcgacgcgatcggcaagatc
gacgtgtacgccacccgcagctatgtcgccatcgcccgtccacacgcggacaaggcgctg
gcgcgcctgcaggccggcaagatcaagggccgcaagttccgcatccgcaagctgtga
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