Listeria seeligeri: lse_0007
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Entry
lse_0007 CDS
T01184
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lsg
Listeria seeligeri
Brite
KEGG Orthology (KO) [BR:
lsg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsg03032
]
lse_0007 (gyrA)
03400 DNA repair and recombination proteins [BR:
lsg03400
]
lse_0007 (gyrA)
Enzymes [BR:
lsg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
lse_0007 (gyrA)
DNA replication proteins [BR:
lsg03032
]
Prokaryotic type
DNA Topoisomerases
lse_0007 (gyrA)
DNA repair and recombination proteins [BR:
lsg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
lse_0007 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
CBH26158
LinkDB
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Position
8065..10590
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AA seq
841 aa
AA seq
DB search
MAETPNQRITEINLNKEMRTSFLDYAMSVIVARALPDVRDGLKPVHRRILYAMNDLGMTS
DKAYKKSARIVGEVIGKYHPHGDTAVYFTMVRMAQDFSYRNMLVDGHGNFGSVDGDMAAA
MRYTEARMSKISMELLRDINKDTIDYADNYDGSEREPVILPARFPNLLVNGSSGIAVGMA
TNIPTHHLGEVIDGVLALSNDPDISIRELMEYIPGPDFPTAGMIMGRSGIRRAYESGRGS
ITVRGRVDIEEKKNGKETIVITEIPYQVNKARLVERIAELAREKKIDGITSLNDESDRSG
MRIVIEVRRDISASVIVNNLFKMTALQTTFGINMLALVDNHPKVLNLKEILYYYLEHQKV
VIRRRTEFELRKAEARAHILEGLRIALDNIDAIIKLIRGSKTSDVAKEGLMTQFNLSDKQ
AQAILDMRLQRLTGLEREKIEEEYQNLVALINDLKAILADDERILEIIREELEEIKVKYA
DKRRTEILAGDLVSLEDEDLIPEEEVAITLTKRGYIKRLPLSTYRSQRRGGRGIQGMSTH
EDDFVEHLVATSTHDTLLFFTNTGKVYRSKGYEVPEYGRTAKGIPIINLLGIESQEQVNA
VINLSEFTDDNYLFFTTKHGVVKRTTLSQFAKIRQSGLRAVELRENDELISVQMTDGNKN
MIIATKHGQSIYFPEANIRVMGRTAAGVRGIRLREGDEVIGMEVLEDDEKVLVVTEKGYG
KQTPASQYPLRNRGGMGVKTVTITEKNGNLVAMKTVTGEEDLMLMTVSGVLIRFEIDTVS
QTGRSAMGVKLIRLDEDEKVATVAKVPKEEDIELEEEIDETLITQVPDESFEDAPGSDIE
E
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacaccaaatcaacgaataacagagataaacttaaataaagaaatgcggaca
tcattcttagattacgcgatgagtgtaattgttgcccgcgccctaccagatgttcgtgac
ggattaaaaccagttcaccgtcgtattttatatgcgatgaatgatcttgggatgacatcg
gataaagcgtataagaaatcagctcgtattgttggggaagttattggtaagtatcacccc
cacggcgatacagcagtttattttacaatggtacggatggcgcaagattttagttatcgt
aatatgctggttgacggacatggtaactttggttcggtcgatggcgatatggcggcagcg
atgcgttatacagaagcaaggatgtctaaaatttcgatggagctacttcgtgacatcaat
aaagatacaattgattatgcagataactatgatggttcagagcgtgagccagtcatttta
ccagcgcgtttccctaacttacttgtcaatggttcgtcagggattgcggttggtatggcg
acaaacattcctactcatcatcttggtgaagtaattgatggtgttttggcacttagtaat
gatccggatattagcattcgcgaattaatggagtatattccaggacctgatttcccaaca
gctgggatgattatgggtcgtagcggaattcgtcgtgcttatgaaagcggacgtggctcc
attaccgttcgtggtcgtgtggatattgaagaaaagaaaaatggtaaagaaacaattgtt
attacagaaattccctatcaagtaaataaagcgcgtctagttgaacgtatcgcagaactt
gctcgcgagaagaaaattgatgggattacttctttaaatgatgagtctgaccgttccgga
atgcgtattgttattgaagttcgtcgtgatattagtgctagtgttattgtgaataattta
ttcaaaatgactgcactacaaacaacttttggtattaatatgctagcacttgtagacaat
catccaaaagtacttaatttaaaagaaattctttattattatttagaacatcaaaaagta
gttattcgtcgccggactgagtttgaacttcgtaaagcagaagcgcgtgctcatatcttg
gaaggtttacgaatcgcactggataacattgatgcgattattaaattaattcgtggatca
aaaacatctgatgttgcaaaagaaggcttgatgacgcaatttaatctttctgacaaacaa
gctcaagcgattttagatatgcgtttgcaacgtttaacaggtttggaacgcgaaaaaatt
gaagaagaatatcaaaacttagtagcattaattaacgatttaaaagctattttagctgat
gatgaacgtattcttgaaatcattcgtgaagaattagaagaaatcaaagttaaatatgcg
gataaacgtcgtacagaaattttagctggtgatttagttagcctggaagatgaagattta
attcctgaagaagaagtagcaattactttgactaaacgtggctatatcaaacgtttacca
ctatcaacttatcgcagtcaacgtcgtggtggtcgtggtattcaaggcatgtctactcat
gaggatgattttgtagaacaccttgtagcgacaagcacgcatgatacactactattcttt
acaaatactgggaaagtttaccgttcgaaaggttatgaagtacctgaatacggacgtaca
gcgaaaggtattccaatcattaacttacttggtatcgaaagccaagagcaagtgaatgct
gtgattaacctatctgaattcactgatgataactatctattcttcacaaccaaacatggt
gttgtgaaacgtacgacgctttctcaatttgcaaaaattcgtcaaagcggtctgcgggct
gtagaacttcgtgaaaatgatgaactgatttctgtgcaaatgactgatggcaataaaaac
atgattatcgcaacgaaacatgggcaatcaatctatttcccagaagcaaatattcgcgta
atgggtcgaacagctgccggcgttcgtggtatcagactgcgtgaaggcgatgaagttatc
ggtatggaagtactagaagatgatgaaaaagtgttagttgtaacagaaaaaggttacgga
aaacaaacaccagcttctcagtatccgcttcgtaatcgtggtggtatgggggttaaaacc
gttactatcacagagaaaaatggaaatcttgtagctatgaaaactgttacaggcgaagaa
gatttaatgctaatgacagtaagtggcgtattaattcgtttcgaaattgataccgtatca
caaactggacgtagcgcaatgggtgtcaaactaattcgtcttgatgaagatgaaaaagta
gccactgtagcgaaagttccaaaagaagaagacatagagcttgaagaagaaatcgacgaa
actcttatcacacaagtacctgatgaaagttttgaagatgctcctggaagtgacatagaa
gaataa
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