Listeria seeligeri: lse_0136
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Entry
lse_0136 CDS
T01184
Name
(GenBank) conserved hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lsg
Listeria seeligeri
Pathway
lsg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
lse_0136
09124 Replication and repair
03420 Nucleotide excision repair
lse_0136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsg03021
]
lse_0136
03036 Chromosome and associated proteins [BR:
lsg03036
]
lse_0136
03400 DNA repair and recombination proteins [BR:
lsg03400
]
lse_0136
Enzymes [BR:
lsg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
lse_0136
Transcription machinery [BR:
lsg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
lse_0136
Chromosome and associated proteins [BR:
lsg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
lse_0136
DNA repair and recombination proteins [BR:
lsg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
lse_0136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Helicase_C
DUF6559
DUF4350_C
Motif
Other DBs
NCBI-ProteinID:
CBH26287
LinkDB
All DBs
Position
132642..134981
Genome browser
AA seq
779 aa
AA seq
DB search
MKAVQISVRRLVEFVLRGGSIDSRMTSSDRALEGTKIHQLLQKSAGEEYQAEVSLKLDRT
VDGVVFLLDGRADGIINEQTIDEIKTTETVMEEITEDFRPLHWAQLICYGFMLAEKSDLP
EVTLQLTYYQVADEEIKQFRRIMSREEMGVFVDDLLSKYAVWAKMSAAWEMKRNKTIQEL
SFPYNSYRRGQRELSIAVYRTAVSGENLFCEAPTGIGKTMSTLFPAVKAMGEGKTDKIFY
FTAKTITRQVAEDALDEMRRKGLAARSVTITAKDKICFLDERKCEPDHCQFARGYYDRLN
EALFDLLGQEEAITRTVVEQYARKYTLCPFELSLDVALFCDAIVCDYNYLFDPVVYLKRF
FSEGPGKYTFLVDEVHNLVDRARSMFSATLRKSLVMQVKRQLDKKLHKRLWNAVNAMNKE
MISLNKELIESGETIHVSKADLAEWNESVLKFTFVAKEWLPQNTQSETQSDVLELYFESL
RYVKIAELYDERYTTQITRTHSDLEIKQLCLDPAFLLSEKLKLGASSVLFSATLRPIDYY
TNVLGGEEDTSRMVFSSPFEQQNMHLLVADNISTKYQMRDQSLASVVEALAALIAGKKGN
YLFFFPSFQYLQNVYDLFREKYPEIVVRKQEGAMDEEQREAFLEAFKAGNSETLVGFCVL
GGVFSEGIDLRGERLIGAAIVGVGLAQLNPESDLIKDYYNETIGQGFDYAYQLPGMNKVL
QAVGRVIRGESDRGVVLLIDERFSASRYRTLFPAHWNHAKIVKNTKEITEQVTEFWRNN
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgtacaaatttcggttaggcgattagtagaatttgttcttagaggcgggagt
attgatagccggatgacaagttcagaccgagctttagaaggaacaaaaattcatcaatta
ctccaaaaatcagcaggagaagaataccaggcggaagttagtttgaaactcgatcgaaca
gtggatggggttgtttttttgctggatggtcgcgcggacgggattattaatgaacaaaca
atagatgaaattaaaacaacagaaacagtcatggaagaaattacggaagatttcagaccg
cttcactgggcgcaacttatttgttatgggtttatgcttgctgaaaaatcggaccttcct
gaggtgacgcttcaattaacttattatcaagtagcagatgaagaaatcaagcaatttagg
cgtataatgagtcgtgaggaaatgggcgtttttgtagatgatttgctttcaaagtatgca
gtttgggcgaagatgtctgctgcttgggagatgaagcgaaacaaaaccattcaggaatta
tcttttccatataatagttatagacgtggtcaaagagaactttctattgcagtttatcgg
acggctgtttcgggtgagaatttgttttgtgaggcgcctacagggattgggaaaacaatg
tcgactttatttccggcagttaaagcgatgggtgaaggtaagacggacaaaattttttat
tttactgcaaagacaattacgcggcaggttgctgaagatgcactagatgaaatgcgccgg
aaagggcttgcggcaagaagtgttacgattacagcgaaagacaaaatatgttttttagat
gaacggaaatgtgaaccggatcattgtcagtttgcgcgtggctattacgatcgtttgaat
gaggcgctgtttgatttgttaggtcaggaagaggcgattactcgaacggttgtggagcaa
tatgcaagaaaatatacactttgtccttttgaattatcacttgatgtggcgcttttttgc
gatgcgattgtgtgtgattataattatttgttcgacccggtagtttatttgaaacggttt
tttagtgaaggacccggaaagtatacatttctggtggatgaagtgcataatttggtggac
cgggcgcgttcgatgttttcggccacactgcggaaatcactcgtaatgcaagtgaagcga
caattagataagaaactacacaaacgactttggaatgcagtgaacgcaatgaataaagaa
atgatttcacttaataaggagctaatcgagtcaggcgaaactattcatgtgagtaaagca
gaccttgctgagtggaacgagtccgtattaaaattcacctttgtcgcgaaagaatggtta
ccgcaaaatactcaatcagaaactcaatcagatgtgttggaactttactttgaaagcctt
cgatatgtgaaaattgctgagctttatgatgaacgatatacgacccagattactcgtact
cattcggatttggaaataaaacaactgtgcttagatccagccttcttactatctgaaaaa
ctgaaactcggggctagttcggtacttttttcagccacacttcggcctattgattattat
acaaatgtgcttggtggagaggaagatacgagtcggatggtttttagctcgccttttgaa
caacagaatatgcatttattagtagctgataatattagtaccaaataccaaatgcgtgat
caaagtttagcgagcgtagtcgaagcattagccgcacttatagcaggaaaaaaagggaat
tatttgtttttcttcccatcttttcagtatttgcaaaatgtatatgatttatttagggag
aaatatccggaaatcgttgtacggaagcaggaaggcgcgatggatgaagaacagcgagaa
gcctttttggaagcatttaaagccggaaattcagaaactttagtaggattttgtgtgtta
ggtggtgttttttcagaagggatagatttgcgcggggaacggctgattggcgcagcgatt
gtaggtgtcggattggcgcaacttaatccagaatctgacttaattaaagattattataat
gaaacaattggtcaaggttttgactacgcatatcagctccctggaatgaataaggtgctt
caagctgtaggacgagtaattcgcggcgaaagtgaccgaggtgtcgtcttgctgatagat
gaacgtttttcggctagtcgttatcggacattgttcccagcacactggaatcacgcgaaa
atcgtcaaaaacaccaaagaaattactgagcaagtaaccgaattttggcgaaataactag
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