Listeria seeligeri: lse_0498
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Entry
lse_0498 CDS
T01184
Symbol
phrB
Name
(GenBank) phrB
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lsg
Listeria seeligeri
Brite
KEGG Orthology (KO) [BR:
lsg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsg03400
]
lse_0498 (phrB)
Enzymes [BR:
lsg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
lse_0498 (phrB)
DNA repair and recombination proteins [BR:
lsg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
lse_0498 (phrB)
Prokaryotic type
lse_0498 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CBH26649
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All DBs
Position
530326..531741
Genome browser
AA seq
471 aa
AA seq
DB search
MTSVMWFRRDLRLNDNKALYQACRDKDDLILLFQVNPEQFINGSPSHQAFFSSVAYFKQK
VDETAHLQIMFGEPMGLLEKLKEKIPAWDKVYFNRDETGYGAKRDEAALQFFAKEEIEVF
AYHDAYLHHADDVKKSATDFYKVFTPYYKKWREEIKERPLPISINPEKVNNTILFPEDEK
QFVEMTRELPPLDATKLGELAAQSHLNHFVKENLADYNEARDFPDLDKTSHLSRFLRTGE
VSIRTVWQAVQEAEHTNGRATFEKELCWRDFYNMIYVSFPNQKNEAIQANYRFIEWENNR
TNFQKWQQGATGFPLVDAAMRQLKETGWMHNRLRMITASFLTKDLLIDWRWGEKYFQQML
IDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSEKFDPSGNFIRKYVQELAGLPDKFI
HQPEKMTNQEQEKFHLIIGEDYPFPIVDHKERRKLAIARYEFSKDYASENI
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgacttcagtaatgtggtttcggagagatttgcgcttaaatgacaataaagcactttat
caagcttgcagagataaggatgatttgattttattattccaagtaaacccagaacaattc
atcaatggaagtccgagtcatcaggcgtttttctcgagtgtggcttattttaaacaaaag
gtcgatgaaacagctcatttacaaattatgtttggggaaccaatgggcctcttagaaaaa
ctaaaagaaaaaattccggcgtgggataaagtttattttaatcgcgatgaaacgggttat
ggggcaaaaagagatgaagcagcgttacagttttttgccaaagaggaaatagaggttttt
gcttaccacgatgcgtatctccaccatgcggatgacgtgaaaaaatcagccacggacttc
tataaagtatttactccttactataaaaaatggcgcgaagaaataaaagaacgcccgtta
ccaattagcataaatccagaaaaagttaacaatactattctgttcccagaagatgaaaaa
cagtttgtagaaatgacgagggaacttccgccattagatgctactaagctaggcgaacta
gcagcacaaagtcatttgaaccattttgtcaaagagaatttggccgattataatgaagcg
agagactttccagatcttgataaaactagccatttatcacgttttttgcggacaggggag
gtttctattcgaacggtttggcaggcagtgcaagaggcagaacatacaaacggaagagct
acattcgaaaaagagctgtgttggcgcgacttttacaatatgatttatgtttctttcccc
aatcaaaaaaacgaagcgattcaagcaaattatcgttttattgaatgggagaataaccgc
acgaattttcaaaaatggcaacaaggtgcgactggttttccgctagttgatgcggcgatg
cgccaattaaaagaaactggctggatgcacaaccgtttacgaatgattacggcttcgttt
ttaacgaaagaccttctgattgattggcgttggggtgaaaaatatttccaacaaatgcta
attgattatgatccagcaagcaacattggaggttggcaatgggctgcttcgactggaacg
gatgcagtaccatattttcgaatttttaatccgaccacccaatcagaaaaatttgatcca
tcaggtaactttattagaaaatatgtccaagagttagcgggtttgccagataaatttatt
catcaaccagaaaaaatgacgaatcaggagcaagaaaaatttcatttgataataggtgaa
gattatcctttcccgattgttgatcataaagaacgtcgaaaacttgctattgcgcgttat
gaattcagtaaggattatgcttcagagaatatataa
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