Listeria seeligeri: lse_0767
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Entry
lse_0767 CDS
T01184
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lsg
Listeria seeligeri
Pathway
lsg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
lse_0767 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsg03019
]
lse_0767 (deaD)
03009 Ribosome biogenesis [BR:
lsg03009
]
lse_0767 (deaD)
Enzymes [BR:
lsg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
lse_0767 (deaD)
Messenger RNA biogenesis [BR:
lsg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
lse_0767 (deaD)
Ribosome biogenesis [BR:
lsg03009
]
Prokaryotic type
rRNA helicases
lse_0767 (deaD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DeaD_dimer
NAT10_TcmA_helicase
CMS1
NABP
Motif
Other DBs
NCBI-ProteinID:
CBH26918
LinkDB
All DBs
Position
825987..827567
Genome browser
AA seq
526 aa
AA seq
DB search
MTLTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLAGKDLIGQAQTGTGKTAAFGL
PMIHKIDQKSNNVQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLK
KFPQIVVGTPGRILDHINRRTLKLENVETLVLDEADEMLNMGFIDDIETILKEVPAERQT
LLFSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEKEKFDVLSRLLDVQ
APELAIIFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATD
VAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVEET
TKKRMQPLQAPTWDEAFAGQLRVATEKIQEAVTEENLSDYKTYANQLLEKYDATDIAAAM
LKMLAKEPDKTPVHITEERPLPSRGGGGYKGKGGNGKGGKGGGGYRGGSGKGGSYRDRNN
SGKGRRSGGGSGGGNGSGGGNRDRRGNGEQRPSGGGNKGSYSQKSK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgacattgacaaaattttcggagttcggactggacgaaaaaattgtaaaatcagtaaat
cggatggggtttgaagaagcgacaccaatccaagaaaagacaattccactaggattagca
ggtaaagacttaattggacaagcacaaacaggtactggtaaaacagccgcttttggtctc
ccaatgatccacaaaattgaccaaaagagtaataacgtacaagctttaattatcgctcca
acacgggaacttgcaatccaagtttcagaagagctttataaacttagctatgacaaacat
gtacgtgtgctagcagtttacggtggtagtgatatcagccgtcaaatccgttcacttaag
aaattcccacaaatcgtagttggtacgccaggacgtattttggatcatattaaccgtcgc
acattgaaactagaaaacgtggaaacacttgtactagatgaagcagacgaaatgctaaat
atgggcttcattgacgatatcgaaactatcctaaaagaagtaccagcagaacgtcaaaca
ttactattttctgcaacaatgcctgatccaattcgccgcatcggtgaacgtttcatgcat
agcccagaacttattcgcatcaaagcgaaagaaatgactgcactattaatcgaacaattc
ttcgtaaaagtgcatgaaaaagaaaaatttgacgtattatctcgtttactagacgttcaa
gcgccagaacttgctattatttttggccgtacaaaacgtcgtgtagatgaattatctcgt
gcgcttgatatgcgtggttatgtagctgaaggtattcacggcgacttaactcaagcgaaa
cgtatgagtgtattacgcaaatttaaagaaggaaaaattgatgttctagttgcgacagac
gtagcagcacgtggacttgatatttccggcgtaactcacgtatataactatgacattcct
caagatccagaaagctatgttcaccgtattggtcgtactggtcgtgctggtaaagaaggt
atggcaattacattcgtacaacctcgcgaaatgggttacctgcgtatcgtagaagaaact
acgaaaaaacgtatgcaaccacttcaagctcctacatgggacgaagcttttgcaggtcaa
ttacgcgtagcaacagaaaaaattcaagaagcagttacagaagaaaatctttctgattac
aaaacatatgctaatcaattattagaaaaatatgatgcaactgatatcgcagctgcaatg
cttaaaatgctagctaaagagccagataaaacaccagttcatattaccgaagagcgtcca
ttaccatctcgtggtggcggcggctacaaaggtaaaggtggaaatggtaaaggcggcaaa
ggtggtggcggctatcgcggcggaagcggtaaaggcggaagctaccgtgatcgtaacaac
agtggaaaaggtcgtcgtagcggcggcggttccggtggtggaaacggttctggcggcgga
aatcgtgatcgtcgtggaaacggcgaacaacgtccaagtggtggtggaaacaaaggaagc
tactcacaaaaatctaaataa
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