Listeria seeligeri: lse_1244
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Entry
lse_1244 CDS
T01184
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lsg
Listeria seeligeri
Brite
KEGG Orthology (KO) [BR:
lsg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsg03016
]
lse_1244 (truB)
Enzymes [BR:
lsg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
lse_1244 (truB)
Transfer RNA biogenesis [BR:
lsg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
lse_1244 (truB)
Prokaryotic type
lse_1244 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Vault_4
DUF6210
Motif
Other DBs
NCBI-ProteinID:
CBH27395
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All DBs
Position
1265984..1266898
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AA seq
304 aa
AA seq
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MNGIIPLWKERGMTSHDCVFKLRKILHTKKVGHTGTLDPEVEGVLPICIGRATKLAEYVT
DEGKVYVAEITLGKSTTTEDATGETVMTKELEEISAEELQAALTKLTGKITQIPPMFSAV
KVNGKKLYEYARAGIEVERPSRQVDIYSLTRLDGDTALTETNPTFRLEISCGKGTYIRTL
AVMIGELLGYPAHMSELERTRSGFFKKEDCLTLAEIDEMMQANNSEFLYPLEKGIESMAK
LVIDEEIHTKVLNGGLLLTSLFKSVENEPRVALVFENKLTAIYKPHPEKKDLWKPEKVIE
LHQA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcattatcccattgtggaaagaacgcgggatgacaagtcatgattgcgttttt
aaattaagaaaaattttacatacaaaaaaagtcggacatacaggtacacttgatccagaa
gtagaaggtgtactcccaatttgtatcggacgtgcaacaaaacttgctgaatatgtaact
gatgagggcaaagtatatgtagcagaaataacactcggtaaatcaactacaacagaagat
gcgactggcgagactgtaatgacaaaagaacttgaagaaatttcagcagaagaacttcaa
gcagcacttaccaaactgacggggaaaatcactcaaattccaccgatgttttcagctgta
aaagtcaacggcaagaagttgtatgaatatgcaagagctggaatagaggtagaaagacca
tccaggcaagtggatatttattcattaacccggttagatggcgacacggcgctaactgaa
acgaatccgactttccggttagagatttcatgtggaaaaggaacttatatcagaacgctc
gcggtaatgattggcgaattgttaggctatccagctcatatgtccgaactagaacgtacc
cgtagtggctttttcaaaaaagaagattgcttaactttagcggaaattgatgaaatgatg
caagcgaataacagcgagtttttatacccgcttgaaaaagggattgaatcaatggcaaaa
ttagttattgatgaagaaatacatacgaaagttctaaacggcggattattactaacatct
ttatttaaaagtgtcgaaaatgaacctcgtgtagcgcttgttttcgaaaataaattaacc
gcaatttataaaccacatccagagaaaaaagacctttggaaaccagaaaaagtcattgag
ctacaccaagcatag
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