Listeria seeligeri: lse_1278
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Entry
lse_1278 CDS
T01184
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
lsg
Listeria seeligeri
Pathway
lsg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
lse_1278 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsg03400
]
lse_1278 (xseB)
Enzymes [BR:
lsg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
lse_1278 (xseB)
DNA repair and recombination proteins [BR:
lsg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
lse_1278 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Paralemmin
DUF4200
DUF3496
HAUS-augmin3
LRIM1_dimer
Prefoldin
Flagellin_C
Motif
Other DBs
NCBI-ProteinID:
CBH27429
LinkDB
All DBs
Position
1294932..1295159
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AA seq
75 aa
AA seq
DB search
MATKKKTFEEAIAELETIVEALENGSASLEDSLDMYQKGIELTKLCQDKLQTAEKRMAKV
VTDAGEEIPFEADGE
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
gtggcaactaaaaagaaaacctttgaagaagcaattgcagaattagaaacgattgtagag
gcactagagaacggtagcgcttctcttgaagattcccttgacatgtatcaaaaaggaatc
gaattaacaaaactatgccaagataagctacaaacagcggaaaaacgcatggcaaaagta
gtcacagatgcaggagaagaaattccttttgaagcggatggtgaataa
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