KEGG   Listeria seeligeri: lse_1316
Entry
lse_1316          CDS       T01184                                 
Name
(GenBank) HDIG domain protein
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
lsg  Listeria seeligeri
Pathway
lsg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lsg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    lse_1316
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsg03019]
    lse_1316
Messenger RNA biogenesis [BR:lsg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     lse_1316
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 HTH_6 FUT8_N_cat
Other DBs
NCBI-ProteinID: CBH27467
LinkDB
Position
1336075..1337637
AA seq 520 aa
MTIAITIISSLLFLIVGLVVGSLIFKSSTEKKLAAARGTAELIVEDAKKEAETTKKEALL
EAKEENHRLRTEIENELRGRRTETQKAENRLLQREENLDRKDTSLSKREATLERKEESIS
KRQQQIEEKESKLAEMIQAEQTELERISALSKEEAKSIILNQVEDELTHDTAIMVKESEN
RAKEESDKKAKNILSLAIQRCAADHVAETTVSVVTLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRREIARIALEKLVQDGRIHPARIEEMVDKARKEVDEHIR
EVGEQATFEVGIHSIHPDLIKILGRLRYRTSYGQNVLNHSLEVSKLAGILAGELGEDVTL
AKRAGLLHDIGKAIDHEIEGSHVEIGVELATKYKENDVVINSIASHHGDTEATSVIAVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYDGVEKSYAIQAGREVRIIVEPDAID
DLASYRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgacaatcgcaatcacgatcatctccagtttgcttttcttaatcgtcggtctagttgtt
ggttctctaatttttaaatctagtacagagaaaaaactggctgctgcaagggggactgcg
gaattaattgtagaagatgcaaagaaagaagcagaaactacaaaaaaagaagcattgctt
gaagcgaaggaagagaatcataggttacgtactgaaatcgaaaatgaacttcgtgggcga
agaacagagacacagaaagcagaaaatcgcttattgcaaagggaggaaaacctcgaccgt
aaagatacttctttaagtaaacgagaagctacacttgaaagaaaagaggagagtatcagt
aaacgtcaacaacaaattgaagagaaagaaagcaaactagctgagatgattcaagcagag
cagacagaacttgaaagaatatctgcactgagcaaagaagaagcgaaatcaatcatcctt
aaccaggtagaagatgaattaacacatgatacagcaatcatggtgaaagaatcagaaaac
cgggcgaaggaagagtcggataaaaaagcaaagaatattctctcactagctatccagcgt
tgtgcagctgatcatgtggcagaaacaactgtatctgttgttaccttaccaaatgatgag
atgaagggacggataatcggacgtgaaggccgtaatatccgtacgcttgaaacgctaact
ggaattgatttgataattgatgataccccggaagcagtaatactttccggatttgatcca
attcgacgtgaaatcgctagaatcgccttagaaaaacttgttcaagatggaagaatccat
ccagctcgaattgaagaaatggtggacaaagcccgtaaagaggtggatgaacacattcgt
gaagtcggggaacaagcaacgtttgaagtgggaattcattccattcatcctgatttgata
aaaattcttggccgcttgcgttatcgtactagttacggtcaaaacgttcttaaccactca
ctcgaagtttcgaaacttgctggaattctagcaggagagcttggagaagacgttacgctt
gctaaacgggccggactgcttcatgacatcggaaaagcaattgaccatgaaattgaagga
agtcacgtagaaatcggcgtggaacttgctaccaaatacaaagaaaatgatgtggttatc
aatagtattgcttcccatcatggagatacagaagctacttctgttatcgctgtattggtt
gctgcggcagatgcactttctgctgcaagaccaggtgctcgtagtgaaacgcttgaaaac
tatatccgtcgtttagaaaaattagaagaaatttctgagtcttatgatggtgtagaaaaa
tcttatgcaattcaagcaggacgcgaagtacgtatcatcgttgagccagatgctattgat
gatcttgcttcttaccgacttgctcgcgacataagaaaacgaattgaagaggaattagat
tatccaggtcatattaaagtgaccgtcattcgtgaaacaagagcagtagaatacgctaag
taa

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