Listeria seeligeri: lse_1566
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Entry
lse_1566 CDS
T01184
Name
(GenBank) exonuclease, SbcC family, putative
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lsg
Listeria seeligeri
Brite
KEGG Orthology (KO) [BR:
lsg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsg03400
]
lse_1566
DNA repair and recombination proteins [BR:
lsg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
lse_1566
Archaeal homologous recombinant proteins
lse_1566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
CBH27717
LinkDB
All DBs
Position
complement(1609527..1612598)
Genome browser
AA seq
1023 aa
AA seq
DB search
MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD
RESFSMRSHFATDKEITEVTLVFRLKEHIYQISRIPQQEIAKQRGNGTTTSPQKAELYEL
IGDEMKLLASSVRDVNTKMEELIQLNVDQFRQILMIPQGEFRELLVSDSKEKEAILQRLA
HTLYYEKVEKILWEKQKEAEVFVIEARKKVTELAELSLPDEDVAGKTTAEISELQTKLVE
KETTTLAEFEEELIFNREQTSKVVEKVTLAKEQLLDWQNLDLYTQEVASLEQETDFYATT
QKQIEKAKRAGNLRSQDALCIRLKEQLQSAETNEQEITEQANKVAIQFSTAKKQTEILAE
QAGELEKNKRLLFQLEEMEPKLMELESTTIQQRSAELEWKNQTDHLQQIITKQQVLTEQT
KQAEERLAEINQAELANLEAMNKRTQLEILIEKNRELISKRTKMVAWEKQKQAEQQILTQ
LLSQTEAIEMMIKQEEAKLKNEQAASLAEHLHDGNACPVCGSTEHPQLATFEEAADLEKL
EETKATFQAKQLAISTAEKAISQLDWQLNEWRDISELKLTELEENVTANTQTLNDLTKEI
EELQSKIAQKETLQTKIETLKNNQSEIELEKNNVAQHVESLHQQVQLAAGKLSYLEQAIP
AELRDKTIFDKQKKMVQTSIQNYEQQKEQVDAAYKQAEKETTRLESTLTVATKTTLEANK
ALQVQREIFKEAMQQNHFLSYEDYKQALMSDETLKIQEEKVSAFQKKRHLAISRQADLTE
KLKDKQKPNIDQLESIMKEKQQILAQLEEKTMRQRELVSKRKELIENYQKSIQAVEQAEV
NYADIGLLSDAARGKNARRITFERYILAMFLDTIINRANHRLSKMTSGRFELHRKIEKAK
GNVQSGLELEVFDEYTGLTRHVKTLSGGESFKTSLALALSLAEVVQEMAGGISLETMFID
EGFGTLDPESLEVAVECLLETQENGRLVGIISHVPELKERISARLEVTATNHGSTTKFIT
ANS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagaccaatcaaactgacgatgcaagcttttggcgcttatgctaaaaaagaagtgatt
gattttgaaaaacttggtacggaacagatttttgtgatatcagggaaaaccggagcagga
aaatcgactatttttgatgcgattagttttgcaatttttggtaaggcaaatacgtttgat
agagagagtttttccatgcggagccactttgcgacagataaagaaataacggaagtgacg
cttgtttttagacttaaagaacatatttatcaaatcagccgtattccacaacaagaaatc
gcaaaacaacgtgggaacggtacgactacttcgcctcaaaaagcggaattatatgagctg
attggcgatgaaatgaaattacttgcaagctcagttcgagatgtgaatacaaaaatggaa
gaattaattcaactaaatgtcgatcagtttagacaaattttgatgatcccccaaggcgag
tttcgcgaactacttgtttcagatagtaaagaaaaagaagcgattctccaacgtctagca
catacactttactatgagaaagtagaaaaaatcttatgggaaaagcaaaaagaagcagaa
gttttcgttattgaagcacgtaaaaaagtgactgagctagcagaacttagtttacctgat
gaggatgttgcagggaaaactaccgctgaaataagcgagttgcaaacaaaattagtggaa
aaagaaacaacaactttagcggaatttgaagaagaattaatttttaacagagaacaaaca
agtaaagtagtggaaaaagtaacccttgcaaaagaacaattgctggattggcaaaattta
gatttatatacacaagaagtagcttcactcgaacaagaaacagacttttatgcaactact
caaaagcaaattgaaaaggcaaaaagagcaggaaatttgcgctcacaagatgcactttgt
attagattaaaagaacaattacaaagcgccgaaacaaacgaacaagaaattacagaacaa
gcaaataaagtggcaatacaattttcaactgcaaaaaaacaaacagaaatactcgctgaa
caagcaggcgagttagaaaaaaacaaacgccttctttttcaactagaggaaatggaacca
aaattaatggaactcgaaagcacaaccatccaacaacgaagtgctgaattagaatggaaa
aatcaaacagaccatttacaacaaataatcactaaacaacaagttttaactgaacaaact
aaacaagcagaagagcgtttagctgaaatcaatcaagcggagttagcaaatttagaggca
atgaataaacgaacacagctagaaatactaatcgaaaaaaatcgagagttaataagtaag
cgaacaaaaatggttgcttgggaaaagcaaaaacaagcagaacaacaaattttaacgcaa
cttttatctcaaactgaagctattgaaatgatgataaaacaagaagaagcaaaattaaaa
aacgagcaagctgcttcacttgctgaacatttacatgatggaaatgcgtgtccggtctgt
ggttcaaccgagcatccacagctggccacttttgaagaagctgccgacttagaaaaactg
gaagaaacaaaagcaacttttcaagcaaaacaattagccatttccaccgctgaaaaggca
attagtcaattggattggcaattaaacgagtggcgcgatatttcagaattaaagctaacg
gaattagaagaaaacgtaacagcaaacacgcaaaccttaaacgatttaacgaaagaaatc
gaggaattacaatcaaaaatagcgcaaaaagaaacactccaaacaaaaattgaaacatta
aaaaacaatcaatcagaaatcgagctagagaaaaacaatgtcgcgcaacatgtggaaagt
ttacatcaacaagtgcaactagctgccggcaaattaagctatttagaacaagcgattcca
gcagaattacgcgacaaaactatttttgacaagcagaaaaaaatggtgcaaacaagcatt
caaaactacgaacaacaaaaagagcaagtagatgcagcatataaacaagcggaaaaagaa
acaactcgcttagaatctaccttaactgttgcgacaaaaacgactttagaggcaaataag
gctttacaagtacaacgggaaatttttaaagaggcgatgcagcaaaatcatttccttagt
tatgaagattataaacaagcattaatgtctgatgaaacgttaaaaattcaagaagaaaaa
gtttctgctttccagaaaaaacggcatttagccatctcgcgtcaagcggatttaacagag
aaactaaaagataaacaaaagccaaatatagatcaactcgaaagcattatgaaagaaaaa
caacaaattctcgcacaattggaagaaaaaacgatgagacaacgcgaactcgtatcgaag
cgaaaagaattaattgaaaactaccaaaaaagcattcaagctgtcgaacaagccgaagtt
aactacgcagatattggtttgctttcagatgcagcccgtgggaaaaatgctcgcaggatt
acgtttgaacgttatattttagcaatgtttttagatacgattattaatcgagccaatcat
cgtttatcgaaaatgacaagcggacgttttgaattacatcgtaaaattgaaaaagccaaa
ggaaacgtacaaagcggactagagttagaagtgtttgacgaatatactgggttaactcgt
catgtgaagacactttcgggcggggaaagttttaaaacatcgcttgcactggcattatca
cttgccgaagttgttcaggaaatggctggcgggatttcacttgagacgatgtttattgat
gaaggttttggaacactagacccggaatcacttgaagtggcagtggaatgtttgctagaa
acacaggaaaacggccgtctcgttggcattatctcgcatgtcccagaattaaaagaacgg
atttctgcaagactcgaagtaaccgcaacaaatcacggaagcactactaagtttattact
gctaatagctaa
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