Listeria seeligeri: lse_1731
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Entry
lse_1731 CDS
T01184
Symbol
pcrA
Name
(GenBank) DNA helicase, ATP-dependent
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lsg
Listeria seeligeri
Pathway
lsg03420
Nucleotide excision repair
lsg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
lse_1731 (pcrA)
03430 Mismatch repair
lse_1731 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsg03400
]
lse_1731 (pcrA)
Enzymes [BR:
lsg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
lse_1731 (pcrA)
DNA repair and recombination proteins [BR:
lsg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
lse_1731 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
lse_1731 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
HHH_3
ResIII
DUF6990
AAA_22
AIG1
Motif
Other DBs
NCBI-ProteinID:
CBH27882
LinkDB
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Position
complement(1779156..1781351)
Genome browser
AA seq
731 aa
AA seq
DB search
MNAKELVDGLNPEQKRAVESTEGPLLIMAGAGSGKTRVLTHRIAYLVRERGVNPYNILAI
TFTNKAAREMKSRIGNLMGGEAESIWISTFHSMCVRILRRDIDRIGYERNFTILDGSDQL
SVIKGILKEKNVDPKKFEPRGILASISNAKNELITASEYIKEASGFYDKMVGEVYEKYEK
KLKKNQALDFDDLIMVTIQLFERVPDVLEYYQRKFQYIHVDEYQDTNHAQYLLVKLLASR
FKNLCVVGDSDQSIYGWRGADISNIMSFEKDYPNAKTILLEENYRSTKRILEAANRVIEN
NGNRKPKNLWTSNAEGKKIFYHKALTEKEEAAYVVMKIQEEVNNSSRPLSDFAILYRTNA
QSRVMEEYFMKSNMAYTMVGGTKFYDRKEIKDILAYLRLISNNEDDISLTRIINVPKRGV
GPGTLEKLNNVATAYDLSLFEVLNRIELAGISAKISKDLVAFHDLVRGFTQMQDFLSVTE
LVEEILEKTGYRAMLKNERTIEAQTRLENIDEFLSVTQNFEKENEDKTLIAFLTDLALVA
DVDKLEEDNEEQNGAVTLMTLHSAKGLEFPVVFLVGMEEGIFPHSRAIYEEDEMEEERRL
AYVGITRAEEELFLTSAYSRMLYGRPSSNQESRFIGEIPRDLLELANENKLKSEKPYAKP
RMPQKATTAYKSSGAETLGWTVGDKASHKKWGVGTVVSVKGEGSGMELDIAFPSPTGVKR
LLAEFAPIEKV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
ttgaatgcaaaagaattagttgacggattaaatcccgaacaaaagcgagcagtagaaagt
acagaaggacctttattaattatggccggagctggtagtgggaaaacacgtgttttaacg
catcggatagcctatttggtaagggaacgtggcgtaaatccgtataatattttggccatt
acgtttacgaacaaagccgctcgtgaaatgaaatcacggattggtaatttaatgggcgga
gaagcagaatctatttggatttccacattccactcgatgtgcgttcgtattttgcgtcgt
gatattgatagaattggttatgaacgtaatttcacgattttagatggtagtgatcaacta
tctgttattaaaggcattttgaaagaaaaaaatgtcgatccgaaaaagtttgaaccacgg
ggtatccttgcttcgattagtaatgccaaaaacgaactaattactgcaagcgaatatata
aaagaagctagtggtttctatgataagatggtcggcgaagtgtatgaaaaatatgaaaag
aaactgaaaaaaaaccaagcgcttgattttgatgatttaatcatggtgaccattcagtta
ttcgaacgggttccagatgttttagaatattatcaacgtaaattccaatatattcatgtg
gacgaatatcaagataccaaccacgcgcaatatttgcttgtgaagttacttgcttctaga
tttaaaaacttatgcgttgtaggtgattcagatcaatcaatctacggctggcgcggggca
gacattagtaatattatgtcttttgaaaaagattacccgaacgccaagacaattttgtta
gaagaaaattaccggtcaacgaagcgtattttagaagcagcaaaccgtgtaattgaaaat
aatggcaaccgcaaaccaaaaaatctttggacgagtaatgcagaagggaagaagattttt
taccataaagcattaacagaaaaagaagaagcagcttatgttgtcatgaaaattcaagaa
gaagtaaacaattcaagtcgtccactttctgactttgcaatcctttaccggaccaatgca
cagtcacgtgtcatggaagaatatttcatgaaatcaaatatggcttatacgatggtcggc
ggtacaaagttctatgacagaaaagaaattaaagatattttagcttacttgcgacttatt
agtaataatgaagatgatattagtttgacacgaattattaatgtaccgaagcggggcgtt
ggtcctgggacgcttgaaaagctaaataatgttgcaacagcatatgatttaagtttgttt
gaagtgcttaatcgcattgaactagctggtatttctgccaaaataagtaaagatcttgtg
gcgtttcatgatttagttcgtggctttacccaaatgcaagatttcttatcagtaacagaa
cttgtagaagaaattcttgaaaaaacaggttaccgcgcaatgcttaaaaacgaacgaaca
atcgaagcccaaacaaggctagaaaatattgacgagtttttatctgtaacgcaaaacttt
gagaaagaaaacgaagataagaccttaattgctttcttaacggacttagcgcttgttgca
gatgttgataaattagaagaagataatgaagagcaaaatggtgcggtaactctcatgacg
ctccactctgccaaagggttagaattcccggttgtctttttagttgggatggaagaaggg
attttccctcattcaagagccatctatgaagaagacgaaatggaagaggaacgacgctta
gcttatgttggtatcacgcgcgcagaagaagaactttttttaacaagtgcttattcacga
atgctctacggtcgtccgtcctctaaccaagaatcgcgttttattggcgaaattccgcgc
gacttactcgaactagctaatgaaaataaattaaaatctgaaaaaccttatgccaaacca
cgcatgccgcaaaaagcaacgaccgcttataaatcaagtggtgctgagacactcggctgg
acagttggcgacaaagctagccacaaaaaatggggcgttggaacagttgttagcgtcaaa
ggcgaaggtagtggcatggagctagatattgctttcccaagcccaactggtgttaaacga
ttgctcgcagaatttgcgccaattgaaaaagtataa
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