Listeria seeligeri: lse_1996
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Entry
lse_1996 CDS
T01184
Name
(GenBank) glycosyl hydrolase, family 38
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
lsg
Listeria seeligeri
Pathway
lsg00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
lsg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
lse_1996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsg04131
]
lse_1996
Enzymes [BR:
lsg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
lse_1996
Membrane trafficking [BR:
lsg04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
lse_1996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38
Alpha-mann_mid
Glyco_hydro_38C
Glyco_hydro38C2
Motif
Other DBs
NCBI-ProteinID:
CBH28147
LinkDB
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Position
complement(2050903..2053563)
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AA seq
886 aa
AA seq
DB search
MTRKKAHIISHSHWDREWFLPLESLRFKLVTLMDEVEGLLDMEAGFNHFHMDGQMIMLED
YLAVKPAKREKMKQLVADGKLRIGPWYMLQDAFLTSGEANIRNLQYGLEMAKEFGHVEKI
GYFPDTFGLYGQIPQLMSQAGFDTVVFGRGVNPTGFNNQVFDSAFASKYSEMFWESPDGS
KVLGILLANWYSNGNEIPVEKEEAKVFWDKKLADVERFASTDEWLFMNGCDHQPVQTDLA
EALEVAKELYPDVDFIHSHFERYQDAVKQSLEPEKLQTVYGELTSQQSDGWSTLANTASS
RIYLKQANEKMERLLERLAEPISVMASDAGVPYPHEYLAFAWKLLMENQIHDSITACSLD
EVHREMEVRFEKVEQVTMSLISNAARKLTEQITIAETGIPITIFHAGGVEIAKTIGIELE
TDEIHFSEMHFEQIPDELAKLPAQTFRLETSEGVEIPVVVEPLGIQFNYDLPERKFRDSY
FARKYKLTFTVENLPAVGYETLYAHAISEVEPEVEPSSALTMENRFLKVEVAANGTYTLF
DKMSGIEARGLGAYEDVGDIGNEYMFKEAGDKLRVDTLQSKPEISVLREDKLGKTIIIRH
EIEIPESASAAAFAEEKRRLVWHPERKSPRSEKRIILKVATELTLNKHDKQLAVRVKIVN
NADDHRFRVLFPTGVTCETHQAGSVFEVTTRPNKQAKEWTNPTSDNRKQAFVTSGNVLIA
THGLPEYEVSENGDKLELTLLRAVSEIGDWGDFPAYEAECHREITAEFYVFLTDGSKAIN
SELPAEVNALLAPVYAMQHKPSNKAKILPENQNFAKWKAANGLVFSTFKLAKDNKRIVRF
YQTATEPTILQTIHTWGKSTILEETSIGQEKNFTVRPNEIITLKGV
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgactagaaagaaagcgcatattatttctcattctcactgggacagagaatggttttta
ccactagaaagcttaagatttaaactcgtaacattaatggatgaagtagagggtttatta
gatatggaagccggttttaaccattttcatatggacggacagatgattatgctcgaagat
tatttggcagtaaaacctgcaaaacgcgaaaaaatgaaacaacttgtagcagatggaaaa
ctgagaattggtccatggtatatgttgcaagatgcttttttaacaagtggagaagcgaac
attcggaatttacaatatggattagaaatggcaaaagagtttggtcatgttgaaaaaatt
ggctatttcccagacacatttggtctatacgggcaaattccgcagttaatgagccaagcg
ggattcgatacggttgtttttggtcgtggagttaatccaacggggtttaataatcaagtt
tttgacagtgcttttgcttcaaaatattcagagatgttctgggaaagtccagatggctcc
aaggttttaggaatcttgcttgcgaattggtattcaaacggcaatgaaattcccgtcgaa
aaagaagaggcaaaagttttttgggataaaaaattagcggatgtcgaacgttttgcatcc
acagacgaatggctatttatgaacggctgcgaccatcaaccagtgcaaacggatttagca
gaagcacttgaggtagctaaagaactttatccagatgttgattttattcatagtcatttt
gaacgttatcaggatgcagtgaaacaaagtcttgaacctgaaaaattacaaactgtttat
ggagagctaactagccaacaatcggatggctggtcaacgcttgcgaacactgcttcttca
cgaatttacttaaaacaagcgaatgaaaagatggagcgtttattagaaagactagctgaa
ccaatttcggtgatggcaagcgatgcaggcgtaccttacccacatgaatatcttgctttt
gcttggaagttactaatggaaaatcaaatacatgatagcatcacagcttgtagtttggac
gaggttcaccgtgagatggaagtaagatttgaaaaagtggaacaagttacgatgtcgcta
atttcaaatgcagctcgaaaattaaccgaacaaataaccattgcagaaacgggaattcca
attacgattttccatgcaggtggagtagaaattgcaaaaacgataggaatagaactggag
acagatgaaattcatttttctgagatgcattttgagcagattcctgatgaattggcaaaa
cttcctgctcaaactttccgcttagaaacaagtgaaggcgttgagattccggttgtagtg
gagccactgggcattcaatttaattatgacttaccagagcggaaattccgtgattcctat
tttgctagaaaatataagttaaccttcactgtcgagaatttgccagctgtcggttatgaa
acgctatatgcccatgccatttcagaagtagaaccagaagtagaaccaagttcagcactt
acaatggaaaaccgctttttgaaagttgaagtagcagcaaacggaacttatactttattc
gataaaatgagcgggatagaggcacgtggacttggagcatatgaggacgttggcgacatt
ggaaatgaatatatgttcaaagaagctggcgataaattacgagtagatacgcttcaatcg
aaaccagaaattagcgttttacgtgaagataaattaggaaaaacaattattatccgtcat
gaaatcgaaatcccagaaagtgccagtgctgctgcatttgcggaagaaaaaagacgctta
gtttggcatccagaacgtaaaagcccacgctcagaaaaacgaattattttgaaagtggcg
acagaattgaccttaaacaaacacgataaacaactagcggtacgtgtcaaaattgttaac
aacgcggatgatcatcgcttccgagtgttattcccaacaggtgtaacttgcgagactcat
caagcaggtagcgtttttgaagtaacgactcggccaaataaacaagcaaaagaatggacg
aatccaacgagcgataatcgtaagcaagcatttgttacaagtggtaatgtgctaattgca
actcatggtctgccagaatatgaagtaagtgaaaatggcgataaacttgaattaacatta
ttacgcgccgtttcagaaattggcgattggggcgacttcccggcatacgaagcagagtgc
catcgcgaaatcacagcagagttttatgtttttctaacggatggatcaaaggcgataaat
agtgagcttcctgccgaagtaaacgcacttctcgcacccgtttatgctatgcaacataaa
ccatctaacaaagcaaaaatactgccagaaaaccaaaattttgctaaatggaaagcggcg
aatggtctcgttttctctacttttaaacttgctaaagacaataagcgaattgtccgtttt
taccaaacagcaaccgagccaactattcttcaaacgattcacacttggggaaaatcaact
atcttagaagaaacgagtattggtcaagaaaaaaacttcactgttcgtccaaatgaaatc
atcacattaaaaggagtgtaa
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