Listeria seeligeri: lse_2618
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Entry
lse_2618 CDS
T01184
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lsg
Listeria seeligeri
Pathway
lsg03030
DNA replication
lsg03430
Mismatch repair
lsg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
lse_2618 (dnaX)
03430 Mismatch repair
lse_2618 (dnaX)
03440 Homologous recombination
lse_2618 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsg03032
]
lse_2618 (dnaX)
03400 DNA repair and recombination proteins [BR:
lsg03400
]
lse_2618 (dnaX)
Enzymes [BR:
lsg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
lse_2618 (dnaX)
DNA replication proteins [BR:
lsg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
lse_2618 (dnaX)
DNA repair and recombination proteins [BR:
lsg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
lse_2618 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_5
AAA_22
AAA_assoc_2
TIP49
AAA_19
AAA_24
PIF1
AAA_16
AAA_7
Mg_chelatase
Bap31_Bap29_C
AAA_14
Rad17
AAA_2
DnaX_C
B12-binding_2
RCF1-5-like_lid
DUF815
IL2
RNA_helicase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CBH28769
LinkDB
All DBs
Position
complement(2687686..2689422)
Genome browser
AA seq
578 aa
AA seq
DB search
MAYQALYRVFRPQSFQDVVGQEHVTKTLKNAIIQNKTSHAYLFSGPRGTGKTSAAKIFAK
AINCEHGHDGEPCNECEICKGTTDGSIPDVLEIDAASNNGVEEIRDIREKVKYAPTVAKY
KVYIIDEVHMLSTGAFNALLKTLEEPPKHVIFILATTEPHKLPLTIISRVQRFDFKRITT
QDIIGRLEFILKEEKIPYDEKALMIVARAAEGGMRDALSLLDQVISYGSEEVTVEDALEI
TGSVAQGLLTKLVSAAFDGDAAEAISTLTALLAEGKDPVRLVEDLLVFFRDVLLYQKAPN
LEETLERALVDDDFVALAKRADSLKIYEFVKILNTAQQQMRFSNHPGIYVEVALVQLTQT
GSVASGNIVTNEAPASGDVADLKHQMEQMQQELQTLKKQIASGAGVAPTEKPAQNRGGAK
KQINNGKQFKAPIGKINHVLGEAKKENLQLIRGCWGELLSMLMASQAALLNDAEPVAASQ
DTFVLKFKHEIHCQMAMDNPNFVETITSSIARLTKVNYTFIGIPEDQWADVRENFLHSHG
GDVSAEEGASPEARKPAEDPFVLEATKLVGEDLLEIKD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcaggctttgtatcgggtttttcggccgcagtcgtttcaggatgttgtagga
caggaacatgtgacgaaaacgcttaaaaatgccattatacaaaataaaacttcgcatgct
tatctgttttcgggacctagggggactgggaagactagtgcggcgaaaatttttgcgaag
gcgattaactgtgaacatggtcatgacggggagccttgcaatgagtgtgaaatttgcaaa
ggaacaacggatggctctataccagatgttcttgaaattgatgctgccagtaataacggg
gttgaagagattcgggatatccgggaaaaagtgaaatatgcgccgactgtggcgaaatat
aaagtatatattattgatgaagtgcatatgttatcgacgggagcgtttaatgcgctacta
aaaacgctagaagaaccgccaaaacatgtcatttttattttggcaacaacagagccacat
aagctaccgctgacaattatttcgcgtgtacaacgattcgatttcaaacggatcacgaca
caagatattattggacgtctggagttcattttgaaagaggaaaagattccttatgatgaa
aaagcgctgatgattgtggcacgtgcagctgaaggtgggatgcgtgatgcactcagcttg
cttgaccaggtgatttcttacggttcagaagaagttaccgtagaagatgcgcttgagatt
accgggtctgttgcacaaggcctgctaactaaacttgttagtgcagcttttgatggtgat
gcggcagaagcaatttcgaccttaacagctttacttgcagagggaaaagatccagttcga
cttgtagaagatttactagtattctttagagacgtattgctttaccaaaaagctcctaat
ttggaagaaactttggagcgagctttggttgatgatgattttgtggcacttgcgaaacga
gctgactcgctaaaaatatatgagtttgtgaagattttaaatactgcacagcaacaaatg
cgtttttcgaatcatccaggtatttatgtagaggtagcgcttgtgcaattaacacaaact
ggttcagtagcttctggaaatatagtaacaaacgaagcaccagcaagcggcgatgtagca
gatttaaaacaccaaatggaacaaatgcaacaagaactccaaacactcaaaaagcaaatc
gcaagcggagcgggagtggcacctactgaaaaaccagctcaaaatcgtggcggtgctaaa
aaacaaatcaacaacgggaagcaatttaaagcgccgattggaaaaattaatcatgtgtta
ggtgaggccaagaaggagaatctgcaattaatccgtggttgttggggtgagttgttatca
atgttgatggcatctcaagcagcacttttgaatgatgcggaacctgtggctgcatctcaa
gacacttttgtgttaaaatttaagcatgagattcactgccaaatggcgatggataatccg
aactttgtagaaaccattacgtcgagtattgcgcgacttacaaaagtgaattatactttt
attggaatcccagaagatcaatgggctgatgtaagagagaatttccttcatagtcatggc
ggcgatgtaagtgcagaggaaggcgcaagtccagaagctagaaaaccagctgaagatcca
tttgtattagaagcaacaaaactagttggtgaagatttgcttgaaattaaagattaa
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