Legionella sainthelensi: CAB17_00875
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Entry
CAB17_00875 CDS
T05293
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lsh
Legionella sainthelensi
Pathway
lsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAB17_00875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsh03019
]
CAB17_00875
03009 Ribosome biogenesis [BR:
lsh03009
]
CAB17_00875
Enzymes [BR:
lsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CAB17_00875
Messenger RNA biogenesis [BR:
lsh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CAB17_00875
Ribosome biogenesis [BR:
lsh03009
]
Prokaryotic type
rRNA helicases
CAB17_00875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
NMT1_2
Helicase_C_2
Cas3-like_C_2
adh_short
AAA_22
AMP-binding_C
PRAI
Motif
Other DBs
NCBI-ProteinID:
AUH70766
UniProt:
A0A2H5FGV2
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All DBs
Position
2967544..2969250
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AA seq
568 aa
AA seq
DB search
MSQEITSFAAFNFSDALNKALEDMKFTTPSPIQVQTIPLLLQGQDAIALAQTGTGKTAAF
ALPILQNLSSSVHGTQALILAPTRELAIQVAEQFELLSANQRSITVAVLCGGQEYGRQLK
QLRAGAQIVVGTPGRILDHLDKGTLNLDNLRTFILDEADEMLRMGFIEDIETIMSKLPEK
KQIGLFSATMPYRIRQIANTYLHNPASIEIRADTATVKSIEQRFLFASGHQKADALLRVL
AVEEYQGVIVFVRTKSSTEEVAEILQQQGLRAMAIHGDITQALRERIIAQFRQGAIDILV
ATDVAARGLDVDRVTHVINYDLPHDNETYVHRIGRTGRAGRSGVAVLFVTPKEGRLITNI
ERHTRQRITKVAVPTDHMIHVARQQRFMANITARLEHEHLISYKRIIEEYIKENDASAID
VAAALALLLHKDMPWQKEQALPKESRSIKENRSERNGKSERSFSRFDERKSFTSDKKNPK
ENRKKFGDIEQDLFRLDVGKVHGVKPGNIVGAIANEAGLQSKHITGLKILDDHSIVRLPK
GMPKEIVSGLTKAWVCGRQLKLTLISNA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagaaatcaccagcttcgctgcctttaatttttctgatgccttaaataaagca
ttagaggatatgaagtttactactccttcgccaattcaagtacaaactatacctttactc
ttacaaggacaggatgcaattgctctggcacaaacaggaacaggtaaaacggctgcattt
gcattacccattttacaaaacttatcttcgtctgtgcacggcactcaagctttaatttta
gcgcctacgcgtgaattagcgattcaagtcgcagaacaattcgaattattaagtgcgaat
caacgcagtattaccgttgctgttttatgtggtggccaagaatatggtcgtcaattgaaa
caattacgagctggggcccagatagtggttggaactccaggacgaattttagatcatctc
gataaagggactttaaatttagataatttacgtacatttattcttgatgaagccgatgaa
atgttgcgtatggggtttattgaagatattgaaaccatcatgtctaaattacccgaaaaa
aagcaaataggtttattttctgcaaccatgccttatcgtatacggcaaattgctaacact
tatttacataatcctgcatcgattgaaatacgtgcagataccgccactgtcaaaagtatc
gaacaacgattcttatttgcatcaggccatcaaaaagctgacgcattattacgggtattg
gctgtagaagaataccaaggcgttattgtatttgtacgcactaaaagtagtaccgaagaa
gtagctgagatattacagcaacaaggactacgcgcgatggccatacatggcgacatcaca
caagcactacgtgaacgaattattgctcagtttagacaaggggcaattgatatcttagtt
gctacagatgtagctgcgcgtggtttagatgttgatcgagttacccacgtaattaattat
gacttaccccatgataatgaaacttatgttcatcgcattggaagaacaggaagagctggt
cgttcaggagtagcggtactctttgtaactcctaaggaaggtcgacttattaccaatatc
gagcgccatacccgtcagcgtattactaaagtagctgtgcccacagatcatatgatccat
gtggcacgtcaacaacgtttcatggcgaatattaccgcacgcctagagcatgaacacttg
atttcttataaacgaattattgaagaatatatcaaagaaaatgatgcttccgcgatcgat
gttgctgctgcacttgccttattactgcataaagatatgccgtggcaaaaagaacaagct
ttgcctaaggaatcacgttcaataaaagaaaatcgttccgaacgcaatggcaaatctgaa
cgttcattttctcgtttcgacgaaagaaaaagttttacttcggataagaaaaaccccaag
gaaaaccgtaaaaaatttggtgacatagaacaagatttgttccgtcttgatgtaggtaaa
gttcatggagtaaaaccaggaaatattgttggtgctattgctaatgaggcaggcctacaa
agcaagcatatcactggccttaaaattcttgatgatcattctattgtacgccttccaaaa
ggtatgcctaaagaaatcgtgagcggtttaaccaaagcttgggtttgtggacgtcagtta
aaattaactttaattagtaatgcgtga
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