Legionella sainthelensi: CAB17_10940
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Entry
CAB17_10940 CDS
T05293
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lsh
Legionella sainthelensi
Pathway
lsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAB17_10940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsh03019
]
CAB17_10940
Enzymes [BR:
lsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CAB17_10940
Messenger RNA biogenesis [BR:
lsh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CAB17_10940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
Flavi_DEAD
UvrD-helicase
Cas3-like_C_2
AAA_22
DUF2529
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AUH72520
UniProt:
A0A2H5FLZ5
LinkDB
All DBs
Position
complement(977621..978889)
Genome browser
AA seq
422 aa
AA seq
DB search
MSFKSLGLIEPLLQSIDELGYKEPSSIQAQAIPTVLSGKDVLASAQTGTGKTASFVLPIL
HMLSVKPRATSNRTRTLILTPTRELASQVHENIIQYGRYLSIRSAVVFGGVKINPQMMKL
RSGVEILVATPGRLLDLYQQRAIQFDQVDTLVLDEADRMLDMGFIHDMRRIINYLPKKRQ
NLMFSATFTDEIRSFVKTILNQPVEIDVTPRNTTVVKIKQTVHPVDKSRKAALLSHLIHR
NKWDQALVFSKTKHGANKLVKQLAEAQIHAAAIHGNKSQSQRTKALNDFKSGELHILVAT
DIAARGIDIDQLPCVVNFDLPQVAEDYVHRIGRTGRAGATGLAISLVSADEISQLQSIEK
LIQHKLNRIEIEDFEPQHNVPQTTISSTTKKYSQIKKKTTSTYAKPHKKPLTRGSRNTRS
KP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaatctttaggtttaatcgagcccttacttcaatctattgatgaattaggc
tacaaagagccctcctctattcaagctcaggctattccaacagtattatctggtaaagac
gtacttgcttcagctcaaacaggaaccggaaaaacggcaagtttcgtgttacctattttg
cacatgctcagtgtaaaacctcgagcaacaagcaatagaacaagaacacttattttaact
ccaacacgtgaattagccagtcaagtacacgaaaatatcatccaatacggacgttatttg
tcaattcgctccgcagtagtctttgggggagtaaaaattaatcctcaaatgatgaaacta
cgttcaggagtggagatactggttgctacaccaggacgtttattggatttatatcaacaa
cgcgccatacaatttgatcaagttgacactttggtgctcgatgaagccgatagaatgctc
gatatgggcttcattcatgacatgagacgaattattaattaccttcctaaaaagcgacaa
aaccttatgttttcagccacgtttactgatgaaattcgtagttttgtaaaaaccattctc
aatcaacccgtagaaatcgatgttacacctcggaatacgaccgtagttaaaataaaacaa
acagtacatccagtggataaaagccgcaaagcagcattacttagccatctgattcataga
aacaaatgggatcaggctttggtattttctaagacaaaacatggtgcaaataaattggtg
aagcaattagctgaggcacaaattcatgctgcggcgatccatggcaataaatctcaatcc
caacgtacgaaggctttaaatgattttaaatctggggaattacatattttagtggctaca
gatattgccgctcgaggaattgatatagatcaattgccttgcgttgttaattttgatttg
ccccaagttgcagaagattacgttcatcgtattggtcgcaccgggcgtgctggtgcaaca
gggttagcgatttcactagtaagcgccgatgagataagtcaattgcaatccatagaaaaa
ttgattcaacacaaattaaatcgtattgaaatcgaggattttgaaccccaacataatgtg
ccccaaaccactatttcttccacaaccaaaaaatattctcagataaagaaaaaaacgact
tcaacttatgctaagccccataaaaaaccattaaccagaggttcaagaaatactcgctct
aaaccttaa
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