Legionella sainthelensi: CAB17_13340
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Entry
CAB17_13340 CDS
T05293
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lsh
Legionella sainthelensi
Brite
KEGG Orthology (KO) [BR:
lsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsh03009
]
CAB17_13340 (rlmD)
Enzymes [BR:
lsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CAB17_13340 (rlmD)
Ribosome biogenesis [BR:
lsh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CAB17_13340 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
TRM5-TYW2_MTfase
MTS
PCMT
Methyltransf_15
Methyltransf_11
Cons_hypoth95
RrnaAD
Methyltransf_4
Methyltransf_23
DREV
PrmA
FtsJ
Motif
Other DBs
NCBI-ProteinID:
AUH72913
UniProt:
A0A2H5FN20
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All DBs
Position
1518965..1520299
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AA seq
444 aa
AA seq
DB search
MRRAKSKTKPVVQTARIDNLSHDGKGIARIDGKATFIQGALPNELVEFQYTRIKKDFDEG
FLLKIFEPSSLRVTPRCPHYAMCGGCSLQHLNPEEQIHFKQDQLLDLLSRYGHTRPQTVL
SPLVASYWNYRNKARLSVRYVEKKQATMIGFRERNNPRYITEITQCPVLNAKLDADILSL
RNLLDSMDDKYCIAQIEVAAGDDEVALIFRNLTPLTAEDGLKIKKFAEEYQYKIYLQPSG
PDSVYCFYPPNANEYLSYHLPDFQISFSFHPTDFTQINSTLNRSMVALALELMELKSTDI
VLDLFCGLGNFSLPMAKFCSKVLGVEGSKTMVERAFMNAKINNLSNVDFYAANLDDINEV
KKLVQQSCNKVLIDPPRSGALEIVKQIDLLNPERIVYVSCNPITLARDTDILINQKGYVL
IKAGVMDMFPHTAHVESIAMFEKG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagaagagcaaagtccaaaacaaaaccagttgtgcaaactgctcgaattgataattta
agccatgatggaaagggaattgcacgtattgatggtaaggcgacttttattcaaggggca
ttgcctaatgaattagttgagttccagtacacgaggataaaaaaagattttgatgaaggt
ttcctactaaaaatttttgagccatcatctcttcgggttacccctagatgccctcactat
gcaatgtgtggcggttgctcgttacagcatctgaatccagaagaacaaatccatttcaaa
caagatcaattgttggatttattatcacgatatggccatactagaccacaaaccgtttta
tcacctttagttgctagttattggaattatcgaaataaagcaagactcagtgtgcgttat
gtagaaaaaaaacaggctacaatgattggatttagagaacgtaataaccctaggtatatt
actgaaattactcagtgtcccgttttaaatgcaaaacttgatgcagatattttgtcttta
aggaacttgttagactctatggacgataaatattgcattgcgcaaattgaagttgcagca
ggagatgatgaagttgctcttatttttcgaaacttgactccattaactgctgaagatggg
cttaaaattaaaaaatttgccgaagaatatcaatataaaatttatctccaacctagcggt
ccagatagcgtttattgtttttatcctccaaatgctaatgaatatttaagttatcactta
ccggactttcaaatttcattctcttttcatccaactgatttcacgcaaattaattcaacg
ttaaatcgctctatggtagctcttgcattagaactaatggaattaaaaagtacggatata
gtgctagacttattctgtgggttgggtaatttttcacttccaatggctaaattttgctcc
aaagtacttggcgtagaaggcagtaaaactatggttgaaagagcatttatgaatgccaaa
ataaataatctttcaaatgtggatttttatgctgctaatttagatgatataaatgaagta
aagaagttagtgcagcagtcatgtaataaagtattgattgatcctcctcgatctggggca
cttgaaattgtgaaacaaatagatctgctcaatccagagcgtatcgtttatgtatcatgc
aatcctattacattggcgcgagatacagatattttaataaatcaaaaaggttatgtattg
ataaaagcaggagtaatggatatgtttcctcatacagctcatgttgaatcaattgcgatg
tttgagaaagggtaa
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