Ligilactobacillus salivarius CECT 5713: HN6_00187
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Entry
HN6_00187 CDS
T01962
Symbol
clpC
Name
(GenBank) Negative regulator of genetic competence
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
lsi
Ligilactobacillus salivarius CECT 5713
Brite
KEGG Orthology (KO) [BR:
lsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lsi03110
]
HN6_00187 (clpC)
Chaperones and folding catalysts [BR:
lsi03110
]
Heat shock proteins
HSP100
HN6_00187 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
NBD_SMAX1
TniB
nSTAND3
AAA_18
AAA_14
IstB_IS21
UVR
ATPase_2
AAA_7
Zeta_toxin
RNA_helicase
bpMoxR
AAA_24
RuvB_N
DNA_pol3_delta2
ABC_tran
AAA_28
Trans_coact
Torsin
DEAD_assoc
Polo_box_3
Caprin-1_dimer
Motif
Other DBs
NCBI-ProteinID:
ADJ78518
LinkDB
All DBs
Position
232785..235283
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AA seq
832 aa
AA seq
DB search
MVMAMEERYTPSAKQVLVLAQQQANYFKHQAIGTEHLLLALTMEKNGVAAKVLQSFVVTE
VDVREEIEHIVGYGNLQRRGADTYLPYSPRTRYVLERAREHAKLFNVEKVGTEHILLALL
EDDKTISSRILAALNIDLRKVKNITYRTMGVDATTANRTRKKLALSEKKQDNGTPTLDEL
ARDLTEMVRKDQIDPVVGRDNEIKRVVQILSRRTKNNPVLLGEPGVGKTAVAEGFSQKIV
NGEVPDNLKNKRVMMLDMGSLVAGTKYRGEFEDRLKKIIEEIREDGNVILFIDEMHTLIG
AGGAEGAIDASNILKPALARGEVQVIGATTLNEYQKYVEADAALERRFASVTINEPTPEV
ALTILKGLRPKYEKHHQLQITDEALESAVKLSKRYIASRFLPDKAIDLMDEAAARVRINN
SQKVDKVSAIKKKLSELSQEKTEALLKEDFEKAAEIRNEELKIQEKLEKQIQRDKDEEDS
NNYRVKVTAEDIAEVVSEWTGVPVTQINRSEGDRLIRLEKILHNRVIGQDEAVKAVSKAI
RRARSGLKDPTRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDSMIRIDMSEYMEKYTTS
RLIGSPPGYVGYDEGGQLTEKVRNNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKG
RKVDFRNTIIIMTSNLGATALRDEKSVGFGAKDVSDDYEAMAAKVRETLKKTFRPEFLNR
LDETVVFHSLNKEEIHQIVKLMAKNIIDRIKEQNINLKITPAAIDIVAEAGFDAEYGARP
IRRVLQDKIEDLLSEELLAGNIETGATVTIGAKKGEITIKVKNPVAAEKINS
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggttatggctatggaagaaaggtatacaccaagtgctaaacaagtattagttcttgca
caacaacaagctaattacttcaagcatcaagcaataggaacagagcatttgcttttagca
ctaacaatggagaaaaatggcgtagctgctaaagtattacaaagttttgtagtaactgaa
gtagatgtgcgagaagaaattgaacatatcgtaggatacggtaatttacaacgtagaggc
gctgatacttatttaccatattccccaaggactcgttatgtattagagcgtgctagagaa
catgctaaactttttaatgttgaaaaggtaggaacagaacatattttgttagcattatta
gaagatgataaaactatttcttcacgtattctagcagctctgaatattgatttacgtaag
gtgaaaaatattacctatcgtacaatgggtgtagatgcaacaacagctaatagaacacgt
aagaaattagcgttatcagaaaagaaacaggataatggtacacctacgttagatgaatta
gcacgtgatttgacagaaatggtgcgtaaagatcaaattgatccagtagttggtagagat
aatgaaattaagcgtgttgttcaaattttaagtagaaggacaaagaataatccagttctt
ttgggagaaccaggtgtaggtaaaacagctgttgcagaaggattttcacaaaagattgta
aatggtgaagttcctgataatttgaagaataagcgtgtaatgatgcttgatatgggatct
ttggttgctggaacaaaatatcgtggtgaatttgaagatcgattaaagaagattattgaa
gaaattcgtgaagatggcaatgttattttattcattgatgaaatgcatactctaataggc
gcgggtggtgctgaaggcgcaatagatgcttccaatattttaaaaccagcattagcgcgt
ggtgaagtacaagtaataggtgcaacaactttaaatgaatatcaaaaatatgttgaagct
gatgcagctttggaaagacgctttgctagtgtgacaattaatgaaccaactccagaagta
gcgttgacaattctaaaaggattacgtcctaaatatgaaaaacatcatcaacttcaaatt
acagatgaggcattagagagtgcagttaagttaagtaaaagatatattgcttcaagattt
ttacctgacaaggcaattgatttaatggatgaggctgctgctagagtaagaattaataat
tcacaaaaagtggacaaagtttctgcaataaagaagaaattatcagagctttcccaagag
aagacagaagcgttgttaaaagaagattttgaaaaagctgcagaaatcagaaatgaagaa
ttaaagattcaagaaaagcttgaaaagcaaatccaacgtgacaaagatgaagaggatagc
aataactatcgtgtaaaagttacggctgaagatattgcagaagttgtttctgaatggact
ggtgttccagtaactcaaattaatcgttctgaaggagaccgactaattagattagaaaag
atattgcataatcgagttataggacaagatgaagctgttaaagcagtaagtaaagcgata
agaagagcaagaagtggtttgaaggatcctacaagaccaattggctcatttatgttctta
ggtcctacaggtgtaggtaaaactgaattagctaaagctttagcagaagctatgtttggc
tcagaggattcaatgattagaattgatatgagtgaatatatggagaaatacacaactagt
cgtttaattggatctcctcctggatacgtaggatatgatgaaggcggacaattaactgaa
aaggttagaaataatccttattcagtagtattattagatgaagttgaaaaagctcataat
gatgttttcaatatcttgttacaagtattggatgatggatttttaactgattctaaaggt
agaaaggtagacttcagaaatacaattatcattatgacatctaacttaggtgctacagcc
ttacgcgatgaaaaatcagtaggttttggtgcaaaagatgtcagcgatgattatgaagca
atggcagcaaaagttagagaaacattgaagaagacttttagaccagaattcttgaatcgt
cttgacgaaactgttgtattccattcgcttaataaagaagaaattcatcaaattgttaaa
ttgatggctaagaatattatagataggattaaagaacaaaatattaatctgaaaattacc
cctgcagcaatagatatagttgcagaagctggatttgatgctgaatatggtgctcgtcct
attagacgtgtccttcaagataagatagaggacttactaagtgaagaattattagcaggt
aatatcgaaactggagcaacagtaacaataggtgctaaaaaaggtgaaataacgataaaa
gttaagaatccagtagctgcagaaaaaataaatagttaa
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