Ligilactobacillus salivarius CECT 5713: HN6_00439
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Entry
HN6_00439 CDS
T01962
Name
(GenBank) CMP-binding factor
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lsi
Ligilactobacillus salivarius CECT 5713
Brite
KEGG Orthology (KO) [BR:
lsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsi03019
]
HN6_00439
Messenger RNA biogenesis [BR:
lsi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HN6_00439
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Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ADJ78721
LinkDB
All DBs
Position
524159..525106
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AA seq
315 aa
AA seq
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MEEKKLLDFSINENMDIFVLIKSAEVRVAKNGKKFIAFNFADKSGEISAKFWNATEKEIE
EFKEGKVVRLKGKRENYQDNPQIKIFNLRIATENEPNKPEYYLQTAPESIKKIEEEINNT
FFEITNPKWNRIVRYLLNKYHDSFFSFPAAKKNHHAFSGGLAFHTVSMLRLAKAIAKEYD
VLNESLLYAGVLLHDLGKVKELSGPIATKYTLEGNMIGHIVIVDEEIVKACEILQIDYNS
EEVILLRHMILSHHGLLEYGSPVRPHIMEAEVLHQIDQLDASIQMMKSSLSHTESGEFSE
RIFGLDGRNFYKPKE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaaaagttattagatttttcaataaatgaaaatatggatatttttgttttg
attaaaagtgctgaagtaagagtggcgaaaaacgggaaaaagtttattgcctttaatttt
gctgataaatcaggtgaaataagtgctaaattctggaatgcaactgaaaaagaaatcgaa
gaatttaaagaaggaaaagttgtcagattaaaaggaaaaagagagaattatcaagataat
ccgcaaattaagatatttaatttaagaattgctacagaaaatgaacctaacaaacctgaa
tattatttacaaactgcaccagaatcaattaaaaaaattgaagaagaaattaataataca
ttttttgaaattactaatcctaaatggaatagaatagtgagatatttgctaaataaatat
catgatagtttcttttcatttcctgcggctaagaaaaatcatcatgctttttctggagga
ttagcatttcatacagtatctatgttgaggttagctaaagcgattgccaaggaatatgat
gtattaaatgagtcattgttatatgcaggagttcttcttcatgacttggggaaagtaaaa
gagctatctggaccgatagcaactaaatatacactagaaggtaacatgatagggcacatt
gtaattgttgacgaagaaattgtaaaagcgtgtgagatattgcagatagattataatagc
gaagaagtaattttgctaagacatatgatattatcacaccatggcttgttagaatatggg
tcaccggtcagaccacatattatggaagctgaggtattacatcaaatcgatcaacttgat
gcatcgattcaaatgatgaagagttcattaagtcatacggaatctggtgaattttctgaa
cgtatttttggccttgatggtcgtaatttctataaacctaaagaataa
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