Ligilactobacillus salivarius CECT 5713: HN6_00450
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Entry
HN6_00450 CDS
T01962
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lsi
Ligilactobacillus salivarius CECT 5713
Pathway
lsi03030
DNA replication
lsi03410
Base excision repair
lsi03420
Nucleotide excision repair
lsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HN6_00450 (polA)
03410 Base excision repair
HN6_00450 (polA)
03420 Nucleotide excision repair
HN6_00450 (polA)
03440 Homologous recombination
HN6_00450 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsi03032
]
HN6_00450 (polA)
03400 DNA repair and recombination proteins [BR:
lsi03400
]
HN6_00450 (polA)
Enzymes [BR:
lsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HN6_00450 (polA)
DNA replication proteins [BR:
lsi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HN6_00450 (polA)
DNA repair and recombination proteins [BR:
lsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HN6_00450 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HN6_00450 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
NYN_YacP
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADJ78732
LinkDB
All DBs
Position
537146..539824
Genome browser
AA seq
892 aa
AA seq
DB search
MVEEKNKLLLIDGNSVTFRAFFALHNSLSRFVNHEGLHTNAIYGFKNMLDSILTKVNPTH
ILVAFDAGKTTFRTEKFTDYKGGRAKTPSELSEQFPEIKNLLEGYRIKTYELKNYEADDI
IGTLAAKAEKKNYDVVVVTGDRDLTQLTTDKITVAVTVKGVSEIEEYTPSHVEEKIGLIP
EQIVDMKALVGDTSDNYPGVTKIGEKTAIKLLKQYGTLDGIYKNIDEMKKSKMKENLIRE
KEIAYLCQDLAEIRKDAPVEIDLEETEWTGKNIEKLVTLYQKLDFRKFLSQLKAESSEQL
DIFESKSNIEFTELTEENLDDINVSDNDEIVFNLEIDGENYHTAEIIGFSIKIGDKYLVS
DDIDLLKKKQIKNLLESDEVEVDLFDGKRQYVGLNRLGVTLSKINFDLLLVSYLLDNSEN
SNDLGLLAQQHEYYDVESDEQIYGKGAKHAVPKDKEVLFEHLVRKVKAINNLKEKLFNEL
EENQQLDLYTKIERPLSIVLANMEIAGVKVDSNRLETMQSELKERLSELEQEIYNEAGEE
FNLNSPKQLGVILFEKLKLPVIKKTKTGYSTAVGVLEQLRGMSPIVDNILQYRQLAKIQS
TYIEGLLKVVSKKDGKAHTRYTQTLTSTGRLSSVDPNLQNIPVRLEEGRKIRQAFVPSHP
GWEIFSSDYSQIELRVLAHISKDKNMQEAFKEGMDIHASTAMRIFNVDSPDEVTPNMRRQ
AKAVNFGIVYGISDYGLSQNIGISRKQAKQFIDTYLDTFSGVKDYMEKIVEFAKENGYVE
TIFNRRRYLPDIKSRNFNLRSFAERTAMNSPIQGSAADIIKVAMINMQEMLKEKNLQAKM
LLQVHDELIFEAPTKEIPLLEDMVPKVMDSAVKLDVPLKVESKHGQTWFDTK
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggtagaagaaaaaaataaattattattaatagatggaaatagtgtcacatttagagct
ttttttgctttgcacaattctttaagtagatttgtaaatcatgaaggattacatactaat
gcaatttatggatttaagaatatgttagatagcatcttaactaaggttaaccctacacat
atattagtagcatttgatgctggtaaaactacttttagaactgaaaaattcactgattat
aaaggtgggagagctaaaactccttcagaattatcagagcaatttccagaaataaaaaat
ttactagaaggatatagaataaaaacttacgagctaaaaaattatgaggctgatgatatt
atcggaacattagctgcaaaagctgaaaagaaaaattatgatgttgtagttgttacagga
gatagggatctaacgcaattaacaactgacaaaataacagttgctgtaacagttaagggt
gttagtgaaattgaagaatatactccaagtcatgttgaagaaaaaataggtttaatccct
gaacaaatcgttgatatgaaagctttagtgggggatacttctgataattatcctggggtt
acaaaaattggtgagaagacagcaattaaattgttgaaacaatatggtactttagatgga
atctataaaaatatagatgaaatgaaaaagtctaagatgaaagaaaatttaatcagagaa
aaggaaattgcttatttatgtcaagatttagcagaaattaggaaagacgctccagttgaa
atagatttagaagaaactgaatggactgggaaaaatattgagaaactagtaacgttatat
caaaaattagattttcgaaagtttttatcacaattaaaggctgaaagtagtgaacaatta
gatatttttgaatctaaaagtaatatagaatttactgaattaacagaagaaaatttagat
gatataaatgttagtgataatgacgaaatagtatttaatttagaaatagatggagaaaat
tatcatacagctgaaattattggtttttctattaaaataggtgataaatatttagtgtcg
gatgatatagatttactaaagaaaaaacaaatcaagaatttgttggaatcagatgaagtt
gaagtagatttatttgatggcaaaagacaatatgttggcttaaatagattaggtgttact
ttatcgaaaattaattttgatttgttacttgtatcatacttgctagataatagtgaaaat
agtaatgatctaggtctgttggcacaacagcacgaatattatgatgtagaatctgatgag
caaatatatggtaaaggtgctaaacatgctgtgccaaaagataaagaagttttatttgaa
catttagtgagaaaagtaaaagcgataaataatttaaaagaaaaattatttaatgagtta
gaagaaaatcagcaactagatctatatacaaaaatagaacgtccattgtcgattgtatta
gcaaatatggaaattgcgggcgtaaaagtggatagtaatagactagaaactatgcaaagt
gaattgaaagaacgattaagtgaactagagcaggaaatatataatgaagctggagaagaa
tttaacttaaattcaccaaaacaattaggtgttatattgtttgaaaaattaaagttacca
gttattaaaaagacaaaaacaggatattcaacagcagtaggtgtattagagcaacttaga
ggtatgtccccaattgttgataatatcttacaatatcgtcaattagctaaaatacaatct
acatatattgagggattgttaaaagtagtttctaagaaagatgggaaggcccatacaaga
tatactcaaaccttaacttcaacgggaagactatcttcagttgatccaaatttacaaaat
attccagttcgtttagaagaaggtcgaaaaatacgtcaagcttttgttccaagtcatcca
ggatgggaaatattttcttctgattattcacagattgaattacgtgtattggcacatatt
tcaaaagacaaaaatatgcaagaggcttttaaggaaggcatggatattcacgcaagtaca
gcgatgagaatttttaatgtagatagtccagatgaagtaactcctaatatgagaagacaa
gctaaagctgttaattttggaattgtatatggtattagcgattacggtttatcacaaaat
ataggaatatcaagaaaacaggctaaacaatttatagatacctatttagatacattttca
ggtgtaaaagattatatggaaaaaattgttgaatttgctaaagaaaatggatatgtagaa
actatttttaacagaagaagatatctacctgatataaagagtcgtaattttaatttacgc
tcttttgctgaaagaacagctatgaattcaccaattcagggtagcgcggctgatattatt
aaggttgcgatgattaatatgcaagaaatgttaaaagaaaagaatttgcaagcaaaaatg
ctacttcaagtacatgacgaattaatctttgaagcaccaacaaaagaaattccattatta
gaggatatggttccaaaagttatggattcagcagttaagctagatgtaccgttaaaagtt
gaaagtaagcatggacaaacttggtttgatacgaagtag
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