Ligilactobacillus salivarius CECT 5713: HN6_00539
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Entry
HN6_00539 CDS
T01962
Symbol
rodA
Name
(GenBank) Rod shape determining protein
KO
K05837
peptidoglycan glycosyltransferase [EC:
2.4.99.28
]
Organism
lsi
Ligilactobacillus salivarius CECT 5713
Pathway
lsi00550
Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
lsi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HN6_00539 (rodA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lsi01003
]
HN6_00539 (rodA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lsi01011
]
HN6_00539 (rodA)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsi03036
]
HN6_00539 (rodA)
Enzymes [BR:
lsi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
HN6_00539 (rodA)
Glycosyltransferases [BR:
lsi01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
HN6_00539 (rodA)
Peptidoglycan biosynthesis and degradation proteins [BR:
lsi01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase
HN6_00539 (rodA)
Chromosome and associated proteins [BR:
lsi03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
HN6_00539 (rodA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FTSW_RODA_SPOVE
DUF6688
Motif
Other DBs
NCBI-ProteinID:
ADJ78819
LinkDB
All DBs
Position
647979..649181
Genome browser
AA seq
400 aa
AA seq
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MQDRQSRERREEEDARIDWGIILSVMVLAIIGMLSIYVAASHDTSTMSVPRTLISQAMWY
AIGIGAIIFIMQFDAEQLWKVAPIAYGLGITLLVLVLIFYSRAYALKTGAKSWLAFGPLT
FQPSEVMKPAYILMLGRVVAQHNAEFYEHTIKTDWNLIGKLALWTLPVAVLLKLQNDFGT
MLVFFAILSGVILVSGVSWKILAPLFGGAAFLGTAGILLAVYGRNLLMAIGFKAYQFARI
EAWLNPSASTTGNSYQLWQSMKAIGSGQLFGTGFNHSNVYVPVRESDMIFSVIGENFGFI
GGCILIFIYLLLIFQMIQVTFDTRNEFYAYISTGVIMMILFHVFENIGMSIGLLPLTGIP
LPFISQGGSALIANMIGIGLIMSMRYHNKSYMFSSSKEFR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggatagacagtcgcgagaacgtcgtgaagaagaagacgcacgaatagattgggga
atcattctatctgttatggttcttgcaataataggaatgctttcaatttatgttgctgca
agtcatgacactagtacaatgagtgtaccaagaacacttatttctcaagctatgtggtat
gcaatagggataggtgcaattatatttattatgcagtttgatgctgaacaattgtggaaa
gtagctcctattgcgtatggtttaggtattactttgttagttttggttttgattttttat
agtagagcttatgctttaaagactggggctaagagttggttagcttttggacctttgact
tttcaaccgtctgaagtgatgaaacctgcctatattttaatgttaggtagggtcgttgca
cagcataatgcagagttttatgagcatactattaaaacagattggaatttgataggaaag
ttggctctatggacattaccggttgctgtattgttgaaattacagaatgacttcggtaca
atgttagttttctttgctattcttagtggtgtgattttagtttcaggtgtttcttggaag
atactagcacctctttttggaggtgctgccttcttaggaaccgctggtattttattagct
gtttatgggagaaatttattaatggcaataggtttcaaagcttatcaatttgctagaatt
gaagcttggttaaacccatctgcatccactacgggtaatagttatcaattatggcaaagt
atgaaagctattggatcaggacagttatttggtactggatttaatcattctaatgtatat
gttcctgttagagaatcggatatgatattttctgttataggtgaaaattttggattcatt
ggtggatgcattttgatttttatatatctattacttattttccaaatgattcaggttacc
tttgatactagaaatgaattttatgcgtatatttctacaggtgttattatgatgatctta
ttccacgtttttgaaaatattggtatgagtattggattattaccattaacaggtattcct
ctaccatttataagccaaggtggatctgctttaattgcaaacatgataggtataggatta
ataatgtccatgagataccataataagagctatatgtttagcagtagtaaggaatttcgt
taa
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