Ligilactobacillus salivarius CECT 5713: HN6_00554
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Entry
HN6_00554 CDS
T01962
Symbol
rnc
Name
(GenBank) Ribonuclease 3 (Ribonuclease III) (RNase III)
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lsi
Ligilactobacillus salivarius CECT 5713
Brite
KEGG Orthology (KO) [BR:
lsi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HN6_00554 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsi03019
]
HN6_00554 (rnc)
03009 Ribosome biogenesis [BR:
lsi03009
]
HN6_00554 (rnc)
03036 Chromosome and associated proteins [BR:
lsi03036
]
HN6_00554 (rnc)
Enzymes [BR:
lsi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HN6_00554 (rnc)
Messenger RNA biogenesis [BR:
lsi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HN6_00554 (rnc)
Ribosome biogenesis [BR:
lsi03009
]
Eukaryotic type
90S particles
RNase
HN6_00554 (rnc)
Prokaryotic type
rRNA processing factors
HN6_00554 (rnc)
Chromosome and associated proteins [BR:
lsi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HN6_00554 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DSRM_MRPL44
DND1_DSRM
Dicer_dimer
Dicer_dsRBD
DSRM_DCL2
Motif
Other DBs
NCBI-ProteinID:
ADJ78834
LinkDB
All DBs
Position
669397..670095
Genome browser
AA seq
232 aa
AA seq
DB search
MIEGLQEMLKRDFNITFKDVDLLDAAFTHASYVNETPERKKKLKYYERIEFLGDAVMQLC
VSEYIYEHYPEMPEGKMSRLRAAMVRADSFSKFAIECHFNEYIRLGKGEEKGNARQRPSL
LCDIFESFIGALYLDQGKDEVVRFISKVIFPKLELGWFDHMMDNKTELQEVLQQNGECKI
KYNEVNVTGPDNERVYTMNVVVNNEVMGEGTGRTKKAAEQMAAYQALKKLRK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaggattacaagaaatgttaaaaagagattttaacatcacttttaaagatgta
gacttattggatgcggcatttactcatgcatcgtatgtaaatgaaactccagaaagaaag
aaaaagttaaaatattatgaaagaatagaatttttgggtgatgctgtaatgcagttatgc
gtgtccgaatatatttatgaacattatccagaaatgcctgaaggaaaaatgtcaagacta
agggcggctatggtaagagctgatagttttagtaaatttgctattgaatgccatttcaat
gagtatattagattaggtaaaggtgaagaaaaaggaaatgctcgtcagcgtccaagtttg
ttatgtgatatttttgaatcatttataggtgccttatatttagatcaaggaaaagatgaa
gttgtaagatttatttctaaggttatttttccaaaattagaattgggttggtttgatcat
atgatggataataagactgaattacaggaagtcttgcaacaaaacggagaatgtaaaatt
aaatataatgaagttaatgttacaggtccggataatgaacgtgtctatacaatgaatgta
gttgttaataatgaagtcatgggcgaaggtactggacgtactaaaaaggctgctgaacag
atggcagcatatcaagctttaaagaaactcagaaagtag
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