Ligilactobacillus salivarius CECT 5713: HN6_00634
Help
Entry
HN6_00634 CDS
T01962
Symbol
topA
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lsi
Ligilactobacillus salivarius CECT 5713
Brite
KEGG Orthology (KO) [BR:
lsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsi03032
]
HN6_00634 (topA)
03400 DNA repair and recombination proteins [BR:
lsi03400
]
HN6_00634 (topA)
Enzymes [BR:
lsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HN6_00634 (topA)
DNA replication proteins [BR:
lsi03032
]
Prokaryotic type
DNA Topoisomerases
HN6_00634 (topA)
DNA repair and recombination proteins [BR:
lsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HN6_00634 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Zn_ribbon_RPB9
PFam54_60
HypA
Motif
Other DBs
NCBI-ProteinID:
ADJ78913
LinkDB
All DBs
Position
766476..767717
Genome browser
AA seq
413 aa
AA seq
DB search
MMVAQQLYEGINIGRGGAVGLITYMRTDSTRISSVAKHEAAVFLHENYGEEYAASKPRQG
KLSENAQDAHEAIRPSSVERTPEKMAKYLDKDQLKLYTLIWSRFVASQMTPAVFDTMRVD
IEQNGVQYRANGSKMKFPGFIKVYKAATSKDNLLPELKVGDEVDIVQNQPNQHFTLPPAR
YSEATLIRTLEENGVGRPSTYAPTLSTIQKRYYVKLVSRKFEPTELGEIVNSMIEECFPD
ILNVDFTAHLEDQLDDVEEGKEEWVRIIDEFYQPFSKEVDNAQVKMDKIKIKDEPAGIDC
EICGAPMVIKLGRYGKFYACSRFPDCRNTKAIVKEIGVVCPKCHKGQIIERKSKKNRVFY
GCSLYPDCDFVSWDKPIGRDCPKCSHYLVEKKIKKGMQVKCSNCDYEEAIQNN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgatggttgcacaacaattatatgaaggtattaatattggacgaggtggagctgtaggt
ttaattacttacatgcgtactgactctactcgaatttcgagtgttgctaagcatgaagca
gctgtctttttacatgaaaattatggtgaagaatatgctgcttctaaaccacgtcagggt
aaattatctgaaaatgcacaggatgctcacgaagctattcgaccatcatcagttgaacgt
acacctgaaaagatggctaagtatttagataaggatcaattaaaattatatacattgatt
tggtcaagattcgtagcaagtcagatgacaccagccgtttttgatactatgcgtgtagat
atagaacaaaatggagttcaatatcgtgcaaatggttctaagatgaaattccctggattt
attaaggtatataaagcagcaacaagtaaagataacttactgccagaattgaaggttggc
gatgaggtggatatagttcaaaatcaaccaaatcaacattttactttaccaccagctcgc
tattctgaagctactttaattcgtactttagaagaaaatggtgtaggtcgaccatctact
tatgcacctactttaagtacaattcaaaagcgttattacgtgaagttagtttcacgaaag
tttgaaccaactgaactaggtgaaatcgttaattccatgattgaagaatgtttccctgat
attttaaatgttgattttacagctcatttggaagatcaattagatgatgttgaagaagga
aaagaagaatgggttagaattatagacgaattctaccaacctttttctaaggaagttgac
aatgctcaagtaaagatggataagattaagatcaaagatgagccagcaggaattgattgt
gaaatttgtggtgctccaatggtcattaaactaggtcgttatggtaaattctatgcctgc
agtcgtttcccagattgtcgaaatactaaggcgatagttaaggaaataggcgtagtttgt
cctaaatgccataaaggtcaaattatcgaacgcaaatctaagaaaaatagagtcttctat
ggttgctcattgtacccagattgtgactttgtttcttgggataaaccaattggacgtgac
tgtccaaaatgcagtcattacttagtagaaaagaaaattaagaagggcatgcaagttaaa
tgtagtaattgtgattatgaagaagcaattcaaaataattaa
DBGET
integrated database retrieval system
