Ligilactobacillus salivarius CECT 5713: HN6_00683
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Entry
HN6_00683 CDS
T01962
Name
(GenBank) Pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lsi
Ligilactobacillus salivarius CECT 5713
Brite
KEGG Orthology (KO) [BR:
lsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsi03009
]
HN6_00683
Enzymes [BR:
lsi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HN6_00683
Ribosome biogenesis [BR:
lsi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HN6_00683
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
NAC
NepR
BRCT
Motif
Other DBs
NCBI-ProteinID:
ADJ78960
LinkDB
All DBs
Position
843418..844314
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AA seq
298 aa
AA seq
DB search
MSDYKVLADKTGRLDKVVTNIFTDYTRSQLKKMIDDGNIKVNGDVKKANYKVNLGDEITF
DKPEVKKLSLEPENIPLDIVYEDDDVIVVNKPQGMVVHPSPGHFEHTLVNALLYHSPLST
INGTYRPGIVHRIDKDTSGLLMVAKNDMAHQSLAKQLKDKTNTREYVALVHGNIKEDSGT
IDAPLGRSKVDRKKQAVVKDGRNAVTHFEVLKRYGDYTLVKCVLETGRTHQIRVHMKYIG
HPLVGDQLYGPRKTLGNSGQFLHAEKLGFVHPRTNEYLEFTAPLPENFKKLLESLDKR
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattataaagtattagcagataagactggtagattggataaagttgttactaat
atttttacagattatactcgatctcaattaaagaagatgattgacgatggaaatatcaag
gtaaatggagatgtgaaaaaagctaattataaagttaatttaggcgatgaaataactttt
gataagccagaagtaaagaaattatctttagaacctgaaaatattccgttagatattgtt
tatgaagatgatgatgtaattgttgtaaataagcctcaaggaatggttgttcatccatct
cctggacattttgaacatactctagtaaatgcattattgtaccattcaccattatctact
attaacggtacttatcgtccaggtattgtccatagaatagataaggatacttcaggatta
ttaatggttgctaaaaatgatatggcacatcaaagcctagcaaagcaattaaaagataag
actaatacacgtgagtatgtagctttagttcacggaaacatcaaagaagatagtggtact
attgatgcaccactagggagaagtaaagttgatcgtaagaagcaagcagtagttaaggat
ggaagaaatgcagtaacccactttgaagttttgaaacgttatggtgattatactttagtt
aaatgtgtcttagaaactggacgaacacatcagattagagttcatatgaaatatataggg
catcctttagttggagatcaattgtatggtccgagaaagacattaggaaatagtggccaa
tttttacatgctgagaaactaggttttgttcatccaagaacaaatgaatacttagaattc
acagcgccactgccagaaaacttcaaaaagctattagaatcgcttgacaaacggtag
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