KEGG   Ligilactobacillus salivarius CECT 5713: HN6_00720
Entry
HN6_00720         CDS       T01962                                 
Symbol
gyrB
Name
(GenBank) Topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
lsi  Ligilactobacillus salivarius CECT 5713
Brite
KEGG Orthology (KO) [BR:lsi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lsi03032]
    HN6_00720 (gyrB)
   03036 Chromosome and associated proteins [BR:lsi03036]
    HN6_00720 (gyrB)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lsi02048]
    HN6_00720 (gyrB)
Enzymes [BR:lsi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HN6_00720 (gyrB)
DNA replication proteins [BR:lsi03032]
 Prokaryotic type
  DNA Topoisomerases
   HN6_00720 (gyrB)
Chromosome and associated proteins [BR:lsi03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    HN6_00720 (gyrB)
Prokaryotic defense system [BR:lsi02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    HN6_00720 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c TOPRIM_C HATPase_c_3
Other DBs
NCBI-ProteinID: ADJ78997
LinkDB
Position
893964..895985
AA seq 673 aa
MPKNNYNDDSIQVLKGLEAVRKRPGMYIGSTDSRGLHHLVYEIFDNAVDEALSGYGKEIN
VIIHKDDSITVVDNGRGMPVGMHSMGIPTVEVIFTVLHAGGKFGQGDYKTSGGLHGVGAS
VVNALSSKLTVNTVRDGIEYEEDFVNGGQPVGTLRKIGKAKRKSGTKVTFKPDANIFSTT
KYNFNTLAERLRESAFLLKGVKITLTDERTDPYTEEEFLYAEGIKEFVEYLNEDKDVLGP
VMYFEGKKDGIEVEVAGQYNDGYSETIMSFVNNVRTKDGGTHEAGMKAAWTKAFNEYARK
INLLKDKDKNLEGSDVREGLSAVVSVRIPEELLQFEGQTKGKLGTPEARQIVDSVVNEQL
GYFLMENGDFAQELVRKSIKAREAREAARKARDESRNGKKRRKSERLLSGKLTPAQSKNA
KRNELFLVEGDSAGGSAKQGRDRKFQAILPLRGKVLNTQKAKLQDIMKNEEINTMIYTIG
AGVGAEFNIDDANYDKVIIMTDADTDGAHIQTLLLTFFYKYMRPMINAGRVYIALPPLYK
IEKTVKKKRVIKYAWTDAELESATKELKKGYTLQRYKGLGEMNADQLWETTMNPETRTLV
RVRIDDDTIAEKRVTTLMGDKVEPRRKWIEKNVKFTLEEDGSLLDTVVAEGAHGEISDDK
LKDTEALFDKNDY
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgccaaagaataattataatgatgactcgattcaagttctaaagggcctagaagctgtt
agaaagcgccctgggatgtatataggctctacagattcacgtggattacatcacttagta
tatgaaatatttgataacgcagttgatgaagcactatctggttatggcaaagaaattaac
gttattattcataaagatgattcaataacagtagtcgataacggacgtggaatgccagtt
ggaatgcattcaatgggaattccaacagtagaagtaatttttaccgttttacatgcaggt
ggtaaatttggtcaaggcgactataaaacttcaggcggattacacggcgttggtgcttct
gtcgtcaacgcactctcctcaaagttaactgtaaatactgttcgagatggaattgaatat
gaagaagattttgttaacggtgggcaacctgtgggaactttacgtaaaattggtaaggcc
aaacgtaaaagcggtacaaaagtaacttttaaacctgatgctaatattttttcaacaaca
aaatataattttaatactttagcagaaagattaagagaatctgctttcttattaaagggt
gtaaagattactttaacagatgaaagaaccgacccatatactgaagaagaattcttatat
gcggaaggaattaaagaattcgtagaatatttaaatgaagataaagatgtattaggtcct
gtcatgtactttgaaggtaaaaaagatggtatcgaagttgaagttgcaggccaatataat
gatggatattctgaaactataatgtcatttgttaataatgttcgtactaaagatggtggg
acacacgaagctggaatgaaagctgcatggactaaggcttttaatgagtatgctagaaaa
attaaccttcttaaagacaaagataagaatcttgaaggtagtgatgttcgtgaaggtctt
tcagcagttgtttctgttcgtattcctgaagaattactacagtttgaaggacaaactaaa
ggaaaattaggaactcctgaagctcgtcaaattgttgatagtgttgttaatgagcaatta
ggttatttcttaatggaaaatggtgattttgcccaagagttagttcgaaaatctattaag
gcacgcgaagcacgtgaagcagctcgtaaagcacgtgatgaaagtagaaatggcaaaaag
agacgtaaaagcgaacgcctattatcgggtaagttaacccctgcgcaatctaagaatgct
aaacgtaatgaattgttcctagtcgaaggtgattctgctggtggttcagcaaaacaagga
agagatagaaaattccaagcaatcctaccattacgaggaaaagtattaaatacacaaaag
gccaaattacaagatatcatgaagaatgaagaaatcaataccatgatctatactattggt
gccggagtaggtgcagaatttaacatcgatgatgcaaattatgataaagtcattatcatg
actgatgctgatactgatggtgcacatatccagacattattattaacattcttctacaag
tatatgcgaccaatgattaatgcagggagagtatacatcgcattaccaccattatataag
attgaaaaaactgttaagaaaaagcgcgttattaagtatgcatggactgatgctgaatta
gaaagtgctactaaagaactaaaaaaaggatacactttacaaagatataaagggttagga
gaaatgaacgctgatcagctttgggaaacaactatgaatccggaaacaagaacgttagtt
cgtgtgagaatagatgatgatacaatagctgaaaaacgtgttacaactctaatgggtgat
aaagtagagcctcgtcgtaagtggattgaaaaaaatgttaaatttactttagaagaagat
ggaagcttgttagatacagttgtcgctgaaggagctcatggcgaaatttctgacgataag
ttaaaggatacagaggctttatttgataaaaatgattattaa

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