Ligilactobacillus salivarius CECT 5713: HN6_00870
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Entry
HN6_00870 CDS
T01962
Name
(GenBank) Penicillin binding protein 2B
KO
K08724
penicillin-binding protein 2B
Organism
lsi
Ligilactobacillus salivarius CECT 5713
Pathway
lsi00550
Peptidoglycan biosynthesis
lsi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HN6_00870
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lsi01011
]
HN6_00870
Peptidoglycan biosynthesis and degradation proteins [BR:
lsi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HN6_00870
BRITE hierarchy
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Gene cluster
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Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
HDC
DNA_gyraseB
DUF3080
Motif
Other DBs
NCBI-ProteinID:
ADJ79146
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All DBs
Position
complement(1078423..1080579)
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AA seq
718 aa
AA seq
DB search
MNTNNKRPIKERQQRMMYNRKYFGRGIFFIVLIVFIVFIGRFFRVAVGHKIYGVDLNKST
QQLYASKTEIKAKRGTIYDAANQPIAEDTTTYSIYIVLSKSAVAYGKKEYLPDSQKKKAA
KVLSDNLNISYKRVLQILNPKDKNTYQVELGNVGKNISLETKKKIDSYHLTGIKFTPSQS
RLYPNGVFASHLIGLAESEDKKLVGIMGLEKVFNKQLSGRDGINNTATDSYGVQLPGSSK
KKRSVQNGDDIYTTLDPKIQTALENLLTQKQKKFKAASINAVVMDSHTGKIVAASQRPTF
DAQTKEGLTNVWRNTLLEDAYEPGSTMKVLTVASAINSGNYDSNATYRSGSYVIDGSTVY
DWNRSGWGNITVKEGFMRSSNAVMAQLEQKMGKKTWMSYIRKFGLLRPVGAGLGAESSGN
INYTYAFDQANTAYGQGIDVTVIQMMQAFSAIANKGKMVKPRLVDKIVDPNTGKTVYKSK
TQVVGKPITAKTSKKVLDMMEAVVYDEKGLGQDYAIDGYKIAAKTGTAQIANSNGTGYLS
GSSNYIFSVVGMAPADNPRYIMYLTVKQPKSFGNNDATKNLSTIFNPIMKKVLDSSQVNN
TNPGTVKVENVVGNSVDDAKDKISKQGLVPVVVGSGDKVEKQSVEGDQTVISGEKVLLLT
NGTKTMPDINGWSRNDIAKLADLTGITVNYTGSGYAYYQSIAAGGALKKSDIVEVKLK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaaataataaacgtcctataaaagaaagacaacaaaggatgatgtacaatcga
aagtattttgggaggggaatattttttattgttcttatcgtttttattgtttttatcgga
cgtttttttcgtgtagctgtaggacataaaatatatggtgtggatctaaataagagtaca
caacagctatacgcaagtaaaactgagataaaagcgaaacgtggaacaatatatgatgca
gctaatcaaccaattgctgaggatacgactacttactcaatatatatagttctctctaaa
agtgcagttgcttatggaaaaaaagaatatttaccggattcccaaaagaagaaagctgct
aaagttttaagtgataatttaaatattagttataaaagagtattacaaattttgaatcct
aaagataagaatacttatcaagttgaattaggaaatgttggtaagaatatctctcttgaa
actaagaaaaagatagattcttatcatttaacaggtataaaatttacaccatcacagtct
aggttatatcctaatggtgtttttgcttcacatttgatagggttagctgaatcggaggat
aaaaagctagtaggtattatgggactagaaaaagtatttaataaacaattatctggtcgc
gatggaataaataatactgctacagatagttacggtgttcagttgccgggatcttctaaa
aagaaacgaagcgttcaaaatggcgatgacatctatacaacattggatcctaagattcaa
actgccttagaaaatttacttacacaaaagcaaaagaaatttaaggctgcatcaattaat
gcggttgttatggattcacatactggtaagatagtagcagctagccaacgtccgacattt
gatgctcaaacaaaagaaggtttaacaaatgtttggagaaatacactgttagaggatgca
tacgaaccaggatcaactatgaaagttttgacagttgcatctgcaattaatagtggaaat
tatgattcaaatgcaacttatagatctggatcatatgtgattgatggatctacagtgtac
gactggaatcgttctggatggggcaatattacagttaaagaaggctttatgcgttcatct
aatgctgtaatggctcaacttgaacaaaaaatgggtaagaaaacctggatgagttatatt
agaaaatttggtttacttcgcccagtaggtgcaggtttaggtgcagaatctagtggtaat
atcaattacacatatgcatttgatcaagctaatacggcttatggtcaagggatagatgtt
actgttattcaaatgatgcaggctttttctgcaattgctaataagggtaagatggttaag
ccacgcttggtagataaaatagttgatcctaatacaggaaaaacagtttataaatcaaaa
acacaagtggtcggtaaaccaattactgcaaaaacaagtaagaaagttttagatatgatg
gaagctgttgtctatgacgaaaaaggtcttggacaagattatgcaattgatggctataag
atagcagctaaaacaggaactgcccaaatcgctaattcaaacggaacaggttatttgagt
ggtagttctaattatatcttctcagttgtaggaatggcgcctgccgataatccaagatat
attatgtatttgactgtaaaacaaccaaaatcatttggaaataatgatgctactaagaat
ctatcaactattttcaacccaattatgaaaaaagttttagattcaagtcaagtaaacaat
actaatcctggtacagttaaagtcgaaaatgttgttggaaactcagttgatgatgctaaa
gataaaatttcaaaacaaggcttggtacctgttgtagttggtagtggtgataaagtagag
aaacaatcagtcgagggagatcagactgttatttctggagaaaaagtattattattgacg
aatggaactaaaactatgccagacataaatggatggtcaagaaatgacattgctaaactg
gctgatttaactggaattacagttaattatactggatctggttatgcatactatcaaagt
atagcggctggaggagcacttaagaaatctgatatagttgaagtaaaattaaaatag
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