Ligilactobacillus salivarius CECT 5713: HN6_00927
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Entry
HN6_00927 CDS
T01962
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lsi
Ligilactobacillus salivarius CECT 5713
Pathway
lsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HN6_00927 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsi03400
]
HN6_00927 (ruvB)
Enzymes [BR:
lsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HN6_00927 (ruvB)
DNA repair and recombination proteins [BR:
lsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HN6_00927 (ruvB)
RecFOR pathway proteins
HN6_00927 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_3
Mg_chelatase
AAA_16
AAA_14
RNA_helicase
nSTAND3
AAA_22
Sigma54_activat
NB-ARC
Bac_DnaA
Sigma54_activ_2
TsaE
AAA_25
AAA_18
AAA_24
IstB_IS21
AAA_17
Rad17
NPHP3_N
AAA_PrkA
NTPase_1
AAA_28
NACHT
HrcA_DNA-bdg
AAA_33
ABC_tran
ATPase_2
DUF815
AAA_19
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
ADJ79202
LinkDB
All DBs
Position
complement(1154138..1155148)
Genome browser
AA seq
336 aa
AA seq
DB search
MYDEERIVSGDSFEGEDLNEQSLRPQTFDQYIGQKLLKDEISVYIQAAKQREESLDHVLL
YGPPGLGKTTLATVIANEMGVKIKTTTGPAIEKPGDLVALLNELEPGDVLFIDEIHRLPK
NVEEILYSAMEDYFIDIIVGQGPTAHPVHFPLPPFTLVGATTRAGLLSAPLRARFGIVGH
MEYYNEVDLSQIIKRSAQILSTGIDDEGAHEIARRSRGTPRVANRLLKRVRDFAEVKHKD
KIDTEIVQFALDLLRVDKVGLDRTDRKLLKAMIELYDGGPVGLNTIAANIGEESDTIADM
IEPYLMQIGFIKRTPRGRMVTLAAYEHLGIKYNKEG
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatgaagagagaatagtttctggtgatagttttgaaggtgaagatttaaatgaa
caatccttacgtcctcagactttcgatcaatatattggtcaaaaattattgaaagatgaa
attagtgtttatatccaagctgcaaagcaaagagaagaatcattagatcatgttttatta
tatggccccccaggtttagggaaaacaactttagcgacagtaattgctaatgaaatgggt
gttaaaataaaaactactactggtccggcgattgaaaaacccggagatttagtagcttta
ctgaatgaattagaaccaggcgacgttttatttattgatgaaattcatcgtttgccaaaa
aatgtagaggaaatcttgtattcagcgatggaagattattttattgatattattgttggt
caaggtccaactgcacatcctgtacattttcctctaccaccatttactttagtaggtgct
actactagggcggggcttttatctgctccattaagagctagatttggaattgtcggtcat
atggagtattataatgaagttgacttatcacaaatcattaaaaggtctgcccaaatttta
agtacaggaattgatgatgagggtgctcatgaaatagcacgtcgttctcgtggaactcca
cgtgttgctaatcgtcttttaaagcgagtccgagactttgctgaagttaagcataaagac
aagattgatacggaaattgtacaatttgcgttagatttgttgcgggttgataaagtaggc
ttagatagaactgatagaaaactactaaaagcaatgattgaattgtatgatggaggtcca
gtgggtctaaatactattgctgctaatattggtgaagaaagtgatactattgctgatatg
attgaaccatatttaatgcaaataggatttattaaacgaactccaagaggcagaatggta
acattagctgcttatgagcatttgggaataaaatataataaagaaggttaa
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