Ligilactobacillus salivarius CECT 5713: HN6_01009
Help
Entry
HN6_01009 CDS
T01962
Name
(GenBank) Tetrapyrrole (Corrin/Porphyrin) methylase family protein
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
lsi
Ligilactobacillus salivarius CECT 5713
Brite
KEGG Orthology (KO) [BR:
lsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsi03009
]
HN6_01009
Enzymes [BR:
lsi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
HN6_01009
Ribosome biogenesis [BR:
lsi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HN6_01009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Cas3_C
Motif
Other DBs
NCBI-ProteinID:
ADJ79283
LinkDB
All DBs
Position
complement(1256963..1257844)
Genome browser
AA seq
293 aa
AA seq
DB search
MVLQVISSFKGQTSNGTLYLVPTPIGNLGDMTPRAIEVLGEVDLIAAEDTRNTQKLLNHF
NISTKQISFHEHNTQERIPKLVEKLKTGINIAQVSDAGMPSISDPGHELVEACIKEDIPV
VPLPGANAGITALIASGLIPQPFYFYGFLPRKNSEQKQELTNLKGHTSTIIFYEAPHRLK
KTLKNMLEVLGNRKVVLCRELTKKFEEFIRGNLEEVMEWANTSEIRGEFVIILDGNHNEQ
VEENKVTTDLSIEEQVKELIEDRNLKPNQAIKEVAKENGLKKQEVYNLYHHLD
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggtattacaagtaattagtagtttcaaaggacaaacttcaaatggaactttatatttg
gttccaactcctattggaaacttaggagatatgacacccagagcgatagaagttttaggt
gaagtagatttaatagcagcagaagatactagaaatacccaaaagctattaaatcatttt
aatatcagtactaaacaaattagttttcatgaacataacactcaggaaagaatacccaag
ttagttgaaaagttaaagacgggtataaatattgcacaagttagcgatgcaggtatgcca
tctataagtgatcctgggcatgaattggttgaggcgtgtattaaagaagatataccagtt
gtaccactaccaggagctaatgcaggtataacagcgttaatagcttcgggattaattcca
cagccattttatttctatggtttcttgccacgaaaaaatagtgaacagaaacaagaatta
acgaatttaaaaggacatactagcacaattattttctatgaagctccacatcgattgaaa
aagaccttaaagaatatgttagaagtgttgggaaatagaaaagttgtattatgccgcgaa
ttgactaaaaaatttgaagaatttattaggggaaacttagaagaagtaatggaatgggca
aatacttctgagattcgtggagaatttgtaataatactagatggtaatcataatgaacaa
gtagaagagaataaggtaaccactgatttaagtattgaagaacaagtaaaagagttgatt
gaagataggaatttaaaacctaatcaagcaattaaagaagtagctaaagaaaatggacta
aaaaaacaggaagtatacaatttatatcatcatttggattag
DBGET
integrated database retrieval system
