Ligilactobacillus salivarius CECT 5713: HN6_01069
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Entry
HN6_01069 CDS
T01962
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase
Organism
lsi
Ligilactobacillus salivarius CECT 5713
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
AAA_30
PAC2
AAA_22
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ADJ79333
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Position
complement(1327383..1328663)
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AA seq
426 aa
AA seq
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MNPKFEEQFRQEGFTEPTLIQKYVYPKLAEGKNVVGLAPTGSGKTLAYSLPLLEKILPKD
GSQLLIMAPSQELAAQLTNTIRPWAKLLDLSVIGLLGGANVKRQIEKLKKHPEVVIGTPG
RLLNLIKLKKLKLHKIESIVIDEADEMLGDEDSLNDVREIVSHCPSEAQISFFSATEAPI
LSELHRWFGVDVEKIDVRKEDNTRGEVTNYMIETPTRKRTEMLRRLGHVDDFYALVFFKQ
TATLRDVAEKLLHMKVPVAILSSEQRQVDRQKSLRQLRKREIRFVLTTDVAARGLDLPDL
PAVVNYDLPKDTNTYIHRAGRTGRMGADGIVVNLGNEHDLRLFKQLMSGTDFVIEKGILY
AGKLILESEKALIIVEDERPNKKATKKKIKDKKPTCKEEKATEKKKKKRKRNLKNKGKRH
GRKKDK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaaatttgaagaacaattccgtcaagaaggatttaccgaacctacgttaatt
caaaagtatgtatatcccaaattagctgaaggaaagaatgtagtaggtttagctccaact
ggttccggtaagactttagcatattcattaccattgctagaaaaaatattacccaaagat
ggaagtcaattattaatcatggctccttctcaagaattggctgcacagttaacaaatacg
ataagaccatgggctaaattattagacttaagtgttattggtttgttaggtggtgctaat
gtaaaacgacaaattgaaaaactaaagaaacatcctgaagtagttattggaactccaggt
agattgttaaatttaataaaactaaagaaactgaagcttcataaaattgaatctattgtt
attgatgaagcagatgagatgttaggtgatgaagatagcttaaacgatgtacgcgaaatc
gttagtcactgtccatctgaagcacaaattagctttttctctgctactgaagcacctatt
ctttctgaattgcatcgttggtttggtgttgatgtagaaaaaatagatgttcgaaaagaa
gataatacacgtggtgaagtaactaactatatgatagaaaccccaacacgtaaacgaact
gaaatgttaagaagattaggacatgttgatgatttttatgctttagttttctttaaacaa
acagctactttacgtgatgtagcagaaaagttacttcatatgaaagtaccagtagctatt
ttgtctagtgaacaaagacaagtagatagacaaaaatcattaagacagttacgtaagaga
gaaataagatttgttttaacaactgatgtagctgctagaggattagatttacctgattta
ccagcagttgttaattatgatttacctaaggatactaatacttacattcatcgcgcagga
agaactggtcgtatgggtgcagatggtattgttgttaacttggggaatgaacatgatttg
cgtttattcaaacaattaatgtctggaacagattttgtgatagaaaaaggtatattatat
gctggaaaattaattctagaatctgaaaaagcattgattatagtagaagatgaaagacct
aataaaaaagcaacaaagaaaaaaattaaagataagaagcctacttgtaaggaagaaaag
gctacagaaaagaagaagaaaaagcgcaagcgtaatttgaaaaataagggcaagcgtcat
ggacgtaaaaaagataagtag
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