Ligilactobacillus salivarius CECT 5713: HN6_01118
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Entry
HN6_01118 CDS
T01962
Symbol
trmA
Name
(GenBank) tRNA (Uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lsi
Ligilactobacillus salivarius CECT 5713
Brite
KEGG Orthology (KO) [BR:
lsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsi03009
]
HN6_01118 (trmA)
Enzymes [BR:
lsi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HN6_01118 (trmA)
Ribosome biogenesis [BR:
lsi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HN6_01118 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_25
PrmA
MTS
Cons_hypoth95
Methyltransf_11
RrnaAD
TRM
N6_Mtase
OST-HTH
N6_N4_Mtase
Methyltransf_23
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
ADJ79380
LinkDB
All DBs
Position
complement(1393214..1394584)
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AA seq
456 aa
AA seq
DB search
MKKKLPVSKNEDLILTIEDLTYQGMGVAKVDGYPLFIEGTLPQEKIKAHVVKVTKNYGFA
KVIDFIEKSPDRVENEDKIYLQTGIAPLQNLSYSAQLKFKRKLVTDLLQKVHLDNLEVAD
TLGMDTPYYYRNKAQVPVREVNGKLEIGFFKRNSHDFVAMEHFLIQDKRIDEILLKVRDI
LRMSKITAYNEKKHTGMIRHILVRRGYYSHEAMVVLVSRVRKIPNLDQIAFLIQQQCLDV
KSVMLNVNPDKTNVILGKKTIKLAGKDTIQDTLNGLKFDISAQSFYQVNPQQTEKLYQLA
IENAELTGKETVIDAYCGIGTISLNMAKFAKKVYGVEIVPEAIEDAKHNASLNDLDNLDF
EVGEAEVWMEKWQKQGIKPDVIMVDPPRKGLTSSLIQSAVAMEPKKVVYVSCNPATLVRD
IQEFMELGYQVTKPIQPVDQFPQTTHVESVTVLEHV
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaattaccagttagtaaaaatgaagatttaattttaacaattgaagactta
acttatcaaggaatgggtgtggctaaggtagatggttatcctttgtttatagaaggtaca
ttacctcaagaaaaaattaaggcacatgtggttaaagttactaagaattatggctttgct
aaagtgatagattttattgaaaagagtccggatagagtagaaaatgaagataaaatatat
cttcaaacagggattgctccactacaaaatttaagttattcagctcaattgaaatttaaa
cgtaagttagtaactgatttgctacaaaaagtgcatttggataatttagaagtggcagat
acgttaggaatggatacaccttactactatagaaataaggctcaagttccagtaagagaa
gttaatggtaagttagagataggatttttcaagcgcaatagtcatgactttgtggcgatg
gaacatttcctcattcaagataaaagaatagacgaaattttgctaaaagtaagagacatt
ttacgcatgagcaagattactgcttataacgaaaaaaagcatactggaatgatacgtcac
attttagtgagaagaggatattattctcatgaagcgatggtagttctagttagtcgagta
agaaaaattccaaatcttgatcaaattgcattcttaattcaacaacaatgtctagatgta
aagagcgtaatgttgaatgtaaatccagataaaacaaatgttattttaggaaagaaaact
ataaaattagctggtaaagatacaattcaagatactttgaatggcttgaaatttgatatt
tcagcacaatctttctaccaagttaatccacagcaaactgaaaaattgtatcaattagca
attgaaaatgcagaattaacaggaaaagaaacggttattgatgcatattgtggaattgga
acgatctcattaaatatggctaaatttgctaaaaaggtatacggtgtagaaattgtccct
gaagccattgaagatgctaagcataatgctagtctaaatgatctagataacttggacttt
gaagttggagaagctgaagtgtggatggaaaaatggcaaaagcaaggaattaagccagat
gtaataatggttgatccaccaagaaaaggtctaacttctagtttgattcaaagcgcagtg
gcgatggaacctaaaaaagtcgtttatgtaagttgtaacccagcaactctagtacgtgat
attcaagaattcatggaactaggataccaagttacaaagcctattcaaccagtagaccag
ttcccgcaaacaacgcatgttgagagtgttactgtgttggagcatgtgtaa
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