Ligilactobacillus salivarius CECT 5713: HN6_01153
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Entry
HN6_01153 CDS
T01962
Symbol
sbcC
Name
(GenBank) Exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lsi
Ligilactobacillus salivarius CECT 5713
Brite
KEGG Orthology (KO) [BR:
lsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsi03400
]
HN6_01153 (sbcC)
DNA repair and recombination proteins [BR:
lsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HN6_01153 (sbcC)
Archaeal homologous recombinant proteins
HN6_01153 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ADJ79406
LinkDB
All DBs
Position
complement(1436528..1439629)
Genome browser
AA seq
1033 aa
AA seq
DB search
MKPLKLRMKYFGPYIDETMNFTEFDNTPLFLISGKTGSGKTTIFDAMSFALFDHTSGDER
DAKQMRSDFATPNDATEVTFVFEHNGIKYTVIRSPKMNLAKKRGNGTRDVEASVKVKYIN
KEQENIEITKKNQADKFLRDLIGLDAQQFTQIVLLPQGKFRNFLNANSADREKILRKLFG
TSLYQKWTEKIQEQAKINESENEKLTTQIQIIRQQVEIEDNDEINDEEWIVKVNNQIEEK
KKKQEKVNNDITISQKQLDNLVETYQNEKVLADSIKQKEDNIHKLQSLENNQDKIELKKI
YAYKLAWYQKNQQIFNNKTDLELQIKEKSDKLVLLNQESKFLIQKHESAKIEAQELEKQQ
ENIENLKNKISTLEVKLPIYQDVKVNQEKLDNLDKNYQDTKNRLDNSVKELEKQKVSYND
LEKELAKLENLDEKQVELVNENNKLTRLSEKIDLVDHLDSEIESKKLQKEKLEKKYQEQE
ELVQESTDTEEKLNTLWIKNQIYFLAKQLAPGEPCPVCGSKEHPLPAKIDELEQVTEEDV
KLANKKAEIERSKAKEFKLRLTSITDEITELEQNKKESIDKILLDFELGEKHSLLELQEI
FQIKNDEYQKKAKDLENKVSLKEKLKGDSQLIKNEIANLEKEKDKLKEQYDDVYYRLKMT
ETTLQEQRKQLSPEFEDVKQVEEYITDTKKRVEDYQINKDKITKELQDTKAELIKVQADI
DSNDQELESKKKGLSKINKEITTLIENSEINLEEIVSLAKNLARLDSINNEINSYEKQIL
VVKTKISELDKTINNREMPNLVESNNVIADKRKELATFQAEFSDITTEINHIQKIKQEVE
QLLQEQKGNYKLMAEWKQLSDVMTGKSATKLSLERYVLQMYLQRVLNVANGRLKELTQGR
YSFQIKDEKGSYSSNTGLEINIYDDNAGKVRPVQTLSGGESFIAALALALALGEVIQANA
GGIFVDALFVDEGFGSLDSDALQIALEALQTIEGKNRMIGIISHVKELQEQIPFQVKISS
NYGKSKISYRKDF
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccattaaagttaagaatgaagtactttggaccatatattgatgaaaccatgaat
tttacagagtttgataatacacctttatttttaatcagtggaaaaacgggtagtgggaaa
acaaccatttttgatgctatgagttttgctttattcgatcatacttctggcgatgaaaga
gacgctaagcagatgagatctgattttgctacacctaatgatgcaactgaagtgacattt
gtatttgagcataatggaataaagtacacagttattcgtagcccaaaaatgaatttagct
aaaaagagaggaaatggaactagagatgttgaggcttctgtaaaagtaaaatatatcaat
aaagaacaagaaaatatcgagattactaaaaaaaatcaggcagataaatttttacgtgac
ttaatcggcttggatgcacagcagtttacacaaattgttttattaccacaaggaaaattc
agaaatttcttgaatgctaatagtgctgatagagaaaagatattaagaaaattatttgga
acgagtctatatcaaaaatggacagagaaaatccaagaacaagcaaaaatcaatgaaagt
gaaaatgaaaagttaacaacacaaatacaaataatccgacaacaagtagaaattgaagat
aatgatgaaattaatgacgaagaatggatagttaaagttaataaccaaattgaagaaaaa
aagaaaaaacaagaaaaagtaaataacgatataactattagtcaaaagcaacttgataac
ttggttgagacttatcaaaatgaaaaagtattagcagatagtattaagcaaaaagaggac
aatatacataaactacaatctctagaaaataatcaagataagattgaattaaagaaaatt
tacgcttataaattggcttggtatcaaaaaaatcaacaaatatttaacaataaaactgat
ttagaattacagataaaagaaaaaagtgacaaattggtattactaaatcaagaaagtaaa
tttttaattcaaaaacatgaatctgcaaaaatagaagcccaagagctagaaaagcaacaa
gaaaatattgagaatctaaaaaataagatttcaacattagaagtaaaattaccaatttat
caagatgtaaaagtaaatcaagaaaaattggataatttggataagaattatcaagatact
aaaaataggcttgataattcagtaaaagaactagaaaaacaaaaagtaagctataatgat
ttagaaaaagaactagctaagttagaaaatttagatgagaaacaagttgagttggttaat
gagaataataaattaactagactgagcgaaaaaatagatttagtagatcatttagatagt
gagattgaatcaaagaaattacaaaaagaaaaattagaaaagaagtatcaagaacaggaa
gaattagtacaagaaagtacagatactgaagaaaagttaaatactttgtggataaaaaat
caaatttactttcttgctaaacaattagcaccaggagaaccttgtccagtatgcggatcc
aaagaacatccattaccagctaaaatagatgaattggaacaagtaactgaggaagatgta
aaattagcgaataagaaagctgaaattgaaagatctaaagcaaaagaatttaagttaaga
ctaacatctataacagacgaaataacagaattagaacaaaataaaaaagaaagcatagat
aaaatattacttgattttgaactaggggaaaaacattctttattagaactacaagaaata
tttcagattaaaaatgatgagtatcagaaaaaagcaaaagatcttgaaaataaagtcagc
ttgaaagaaaagttaaaaggtgacagtcaattaataaaaaatgaaatagctaatttagag
aaagaaaaagataaattaaaagaacaatatgatgatgtatattatcgcttaaaaatgacc
gaaactactctacaagaacaaagaaagcagttgagtcctgaatttgaagatgtaaaacaa
gttgaagaatatattacagatactaaaaagagagtggaagattatcaaataaataaggat
aaaatcactaaagaacttcaagatactaaagcagaattaattaaagttcaagctgatatt
gatagcaatgaccaagaattagaaagtaagaaaaaagggttaagtaaaattaataaagaa
ataactacattaatagaaaatagtgagattaatttagaagaaatagtttccttagccaag
aatctagcacgattagattctattaataatgaaattaatagttatgaaaaacaaatatta
gtagtaaaaacaaaaatatcggaattggacaaaacaattaataatagggaaatgccaaat
ttagttgaaagtaataatgtaattgctgataaaagaaaagaacttgcaacattccaagca
gaatttagtgatattacaactgaaattaaccatatacaaaaaataaagcaagaagtagaa
caattgttgcaagaacaaaaaggaaattataagttaatggcagaatggaaacaattatca
gatgtaatgactggtaaaagtgctactaagttgagtttggaaagatatgtgctacaaatg
taccttcaaagagtgttaaatgttgctaatggacgtttgaaagaattaactcaaggaaga
tatagtttccaaataaaagatgaaaaaggtagttatagtagtaatacaggattagagatt
aatatatacgatgataacgctgggaaagttagaccagttcaaactttatcaggtggtgaa
agttttattgctgctttagctctagcactagctttaggtgaggttatccaagctaatgct
ggtggaatatttgtggatgctttatttgtagacgaaggatttggttccttggatagcgat
gcattacagatagcattggaagccttgcagacgattgaaggaaaaaatagaatgataggg
attatcagtcatgttaaagaattgcaagaacaaataccattccaagtaaaaatatctagc
aattatggaaaaagtaagataagttatagaaaggatttctaa
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