Ligilactobacillus salivarius CECT 5713: HN6_01238
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Entry
HN6_01238 CDS
T01962
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lsi
Ligilactobacillus salivarius CECT 5713
Pathway
lsi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HN6_01238 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsi03400
]
HN6_01238 (xthA)
Enzymes [BR:
lsi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HN6_01238 (xthA)
DNA repair and recombination proteins [BR:
lsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HN6_01238 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ADJ79491
LinkDB
All DBs
Position
1545997..1546824
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AA seq
275 aa
AA seq
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MKLISWNIDSLNAALTSDSARAKQSREVLATIIDENPDIIAIQETKLSATGPTKKHQTIL
AEQFPDYEIAWRSSQEPARKGYAGTMFLYKNNLNPTISYPEIDAPEPMDSEGRIITLEFD
NFYVTQVYTPNAGDGLRRLAERQVWDEKYADYLVSLDQNKPLLSSGDFNVAHKEIDLAHP
GNNHHSAGFTDEERAGFTNLLNKGFTDTFRYVHGDVKDVYSWWAQRSRTSKINNSGWRID
YWLASNRIADKIVRSEMLDSGERRDHTPIVLEINI
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttatttcatggaatatcgattctttgaatgctgctttaactagtgattctgct
cgcgctaaacaatcacgtgaagtcttagcaactattattgatgaaaatccagatataata
gcaattcaagaaacaaaattatcagctacaggtccaactaaaaaacatcaaactatttta
gctgaacaatttccagattatgaaattgcttggagaagttcacaagaaccagctcgtaaa
ggttatgctggtactatgtttctttataaaaacaatttaaatcctactatcagctatcct
gaaattgatgcacctgaacctatggattctgaaggtagaatcatcacacttgaattcgat
aatttttacgttactcaagtatatactcctaatgctggcgatggtttgagacgtttagct
gaacgtcaggtttgggatgaaaagtacgctgactacctagtttcattggatcaaaataaa
cctcttctttctagcggtgatttcaatgttgctcataaggaaatcgacttagctcatcct
ggtaataatcatcattctgctggtttcactgatgaagaaagagcaggctttactaacttg
cttaataagggctttacagataccttccgctatgttcatggcgatgttaaggatgtttac
tcttggtgggctcaaagaagtcgtacaagcaagattaacaactctggttggagaattgat
tattggctagcaagtaatcgtattgctgataaaattgttcgttctgaaatgttggattct
ggtgaacgtcgcgatcatactccaatagtgttagaaattaatatctag
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