Ligilactobacillus salivarius CECT 5713: HN6_01650
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Entry
HN6_01650 CDS
T01962
Symbol
abpT
Name
(GenBank) Salivaricin ABC-transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
lsi
Ligilactobacillus salivarius CECT 5713
Pathway
lsi02010
ABC transporters
lsi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lsi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HN6_01650 (abpT)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HN6_01650 (abpT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsi01002
]
HN6_01650 (abpT)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsi02000
]
HN6_01650 (abpT)
Peptidases and inhibitors [BR:
lsi01002
]
Cysteine peptidases
Family C39
HN6_01650 (abpT)
Transporters [BR:
lsi02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
HN6_01650 (abpT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
Peptidase_C39_2
AAA_29
ABC_ATPase
nSTAND3
RsgA_GTPase
DUF87
NB-ARC
AAA_18
AAA_22
SMC_N
nSTAND1
MobB
AAA_16
Mg_chelatase
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ADJ79879
LinkDB
All DBs
Position
pHN3:complement(201071..203230)
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AA seq
719 aa
AA seq
DB search
MLRKYRKDYVSQVDESDCGVASLAMILKHYGSALSLAYLRNIAKTTMEGTTALGLVKTAQ
ALGMETQAVKADMSLFGMKDITYPFIVHVVKEETLLHYYVVLKATPRYILIADPAPDVGI
TKMSYERFEKEWTGITLFIVPGIEYKPTKETRQSLISLFSKLFKQKQLIVNIVLAALLIT
IISILGSYFLQGIIDTYIPNGMHSTLAIIALGLLVIYVFNSIFTYARDFLLAILGQRLSI
EIILSYIRHIFELPMEFFATRKTGEIVSRFNDASKIIDALASTVVSIFLDVSIVVIMGII
LAIQNLKLLGITLITLPIYTIIILTFTKAFERLNNKQMESNAILSSSIIEDIQGIETIKA
LNSEQMRYRKIDSQFVDYLRKSLAYIKTDSLQQALKLFIQQTLNVIVLWLGANLVISNQL
SIGQLMTFNALLSYFVNPLQNIINLQPKLQSARVAHNRLNEVYLVESEFKDRKAVHDVTQ
LQGDIIFKDVDYHYGYGENVLDKVNLTLKQGEKLTIVGMSGSGKSTLVKLLVNFFAPVSG
SIKLNNHDINNIDKHALRSYINYIPQNPYIFTGTIEDNLRLGNRSNVTDEDILMACKIAM
IDIDIAKMPLQLKTELDENANILSGGQKQRITIARALLSPAQVLIFDESTSGLDAITEKK
LIDNLMKLKSKTIIFIAHRLSIAKRTNNILVLDSGKIVEKGRHDELLAKKGYYYNLVNS
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
ttgttaagaaagtatcgaaaagattacgtttcacaagtagacgaatctgattgtggcgtg
gcttcgttggctatgattttgaaacactatggatcagcactatcattagcgtatttaagg
aacattgctaagacaacaatggaggggactacagctttaggtcttgttaagacagcacag
gctttaggaatggaaacacaagccgtaaaagctgatatgtctctttttggaatgaaagac
attacatatccatttattgtacatgtggttaaagaagagacgttattacattattatgta
gtattgaaagcaacgcctagatatattttaattgctgatccagctccagatgtagggata
actaaaatgtcgtatgaacgttttgaaaaagaatggacagggattactttattcatcgtt
ccaggaattgaatacaagccgacaaaagagactagacaatcattaatatcactatttagt
aaattatttaagcaaaagcaactaatagttaatattgtattggcagctttgttaattaca
attattagtatattgggatcatattttttacagggaataattgatacatatattcctaat
ggtatgcatagtacactggcaattattgctttgggattactagtaatatatgtgttcaat
tcaatttttacatatgcaagggattttttattagcaattttaggacaacgactttcgatt
gaaattattttaagttatattagacatatttttgagttgcctatggaattttttgcgacc
agaaaaactggggaaatagtttctcgtttcaatgatgctagtaaaattatagatgcttta
gcaagtactgtggtatctatttttttagatgtaagtattgtagttattatgggaataatc
ttggctattcaaaatcttaaattactaggaataactcttatcacacttccaatttacacg
attattattcttacatttacaaaggcatttgaaagattgaataataaacaaatggaaagt
aatgcgatacttagttcatctattattgaagatattcaaggaatagaaacaataaaagcc
ttaaacagcgaacaaatgcgttaccgcaaaattgatagtcaatttgtggactatttgcgt
aaatcgttagcatatataaaaacagactcgttgcaacaagcattaaagttatttattcaa
caaacattaaatgttatagtcctatggttaggggcaaatctggtaattagtaatcaactc
tctataggacaattaatgacttttaacgcactattaagttattttgtgaatccattacaa
aatatcataaatttacagccaaaattgcagagtgcaagggtagctcacaatcgtttgaat
gaggtttacttggttgaaagtgaatttaaagatagaaaggctgttcatgatgttactcaa
cttcaaggagacattatatttaaagatgttgattatcactatggttatggtgaaaatgtt
ttggataaggttaatttgactttaaaacagggagaaaaactaactatagtaggtatgagt
ggctctggcaaatcaacgttagttaaactattggtgaatttttttgctccagtttcaggg
agtataaaactaaataatcatgatattaataatattgataagcatgcactgcgttcctat
attaattatataccacagaatccatatatttttaccgggacaatagaagataatcttaga
ctaggtaatcgatctaatgtgactgatgaggatattcttatggcttgtaaaatagcaatg
attgatatagatatagcgaagatgccactacaattaaaaactgaattagatgaaaatgct
aatattttatcaggtggacaaaaacaaagaattacaattgctagagccttattatctcca
gcacaagtattgatttttgatgaatctacaagtgggttagatgctattacggagaaaaaa
ctaattgataatttaatgaaattaaagtcaaaaactataatttttattgcacatagatta
tctatagctaagcgaacaaataatattctagtattagatagcggaaaaattgtagaaaag
ggtagacatgatgaattattagctaaaaaaggatactactacaatttagttaatagttag
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