Ligilactobacillus salivarius CECT 5713: HN6_01665
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Entry
HN6_01665 CDS
T01962
Name
(GenBank) Transcriptional regulator, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
lsi
Ligilactobacillus salivarius CECT 5713
Brite
KEGG Orthology (KO) [BR:
lsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsi03000
]
HN6_01665
Transcription factors [BR:
lsi03000
]
Prokaryotic type
Helix-turn-helix
Other families
HN6_01665
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIS
HTH_6
SIS_2
MarR
HTH_24
LacI
HTH_26
Mga
HTH_3
Cyt_b-c1_8
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ADJ79894
LinkDB
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Position
pHN3:223014..223838
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AA seq
274 aa
AA seq
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MNLLNNIEAIFSTLSRQERKVALKVLQNPQEVQSMNITKLAKKAGVSNATITRFVRRMEC
SDFHDFKLKLAISAASSPEVPVSSESDSMGDKVYEFYQKVLQGTWKQLDTDTIHNIVHAI
TKARRVYVYGLGSSGYTAQEFTQRLIRMGIAAFCTVDSHMMFIDSTIVNSDDVIIAISQS
GNTDDVNVACSLAKQKGTKIISITGFYQSPLIELSTWSVVVKNSNFVDNTRFINSQLAIV
YVIDIITMELMEKSEYSSTMNKTVELIMDRKLSK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgcttaataatatagaagcaattttctccacactttctcgccaagaacgtaaa
gtagctttaaaagttcttcaaaatcctcaagaagtacaatctatgaatattactaaatta
gctaaaaaagcgggtgttagtaatgctactatcactcgctttgtgcgtagaatggaatgt
tctgattttcatgattttaaattaaagctcgctatatctgctgctagctctcctgaggtt
ccagtttcttctgaaagcgattctatgggagataaagtttacgaattctatcaaaaagta
cttcaaggtacttggaagcaactagatactgacactattcataatattgtccatgctatt
actaaggctcgtcgtgtctacgtttacggtttaggaagttcaggttatactgcacaagaa
ttcactcaacgactaattcgtatgggaattgctgctttttgtacagtcgatagccatatg
atgtttatagatagtactattgtaaactctgatgatgttatcatcgccattagtcaatct
ggtaatactgatgatgtaaatgttgcttgttctttagcaaaacaaaaaggaacaaaaatt
atcagcatcactggattttatcaaagtccacttatcgaactctctacttggagtgtagtt
gttaaaaacagtaattttgttgataatactcgctttattaattctcagctagcgatcgtt
tatgttatcgatattattacaatggaactgatggaaaaatctgaatatagttctactatg
aataagaccgttgaattaatcatggatcgaaaattatctaaataa
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